Miyakogusa Predicted Gene

Lj1g3v0099460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0099460.1 Non Chatacterized Hit- tr|I1L858|I1L858_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50,2e-17,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; Plant lipid t,CUFF.25204.1
         (807 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66468 similar to UniRef100_A7NWR1 Cluster: Chromosome...   127   1e-28

>gnl|LJGI|TC66468 similar to UniRef100_A7NWR1 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 784

 Score =  127 bits (64), Expect = 1e-28
 Identities = 253/314 (80%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 214 gcccaaatcagcacgccatgtaatgcctcagtgctaagcactctcttcacaccttgtatg 273
           ||||| |||| ||| |||||||| |  |||| | ||||||||  |||||| ||||| |||
Sbjct: 163 gcccagatcaacacaccatgtaacgtatcagcgataagcacttccttcaccccttgcatg 222

                                                                       
Query: 274 agtttcctcacaagtagcagtgccaatggctcctcctcgccaaccacagagtgctgcggt 333
           ||||||||||||| |||||||| ||||||  ||||    || ||  ||||||||||||  
Sbjct: 223 agtttcctcacaaatagcagtggcaatggaacctca---cctactgcagagtgctgcgac 279

                                                                       
Query: 334 gctctcaagtccctcacaagtagtggtatggactgtttgtgtctcttggtcaccgccagc 393
            |  |||| |||||||||||| | || | |||||| || |||||| | ||||||| || |
Sbjct: 280 tccatcaaatccctcacaagtgggggcagggactgcttatgtctcgttgtcaccggcaac 339

                                                                       
Query: 394 attcccttcaagttaccgatcaacagaaccttggctatctctctccctcgtgcctgcaac 453
            |||||||||   ||||||||||| | || ||||| |||||||| |||||||| ||||| 
Sbjct: 340 gttcccttcagcataccgatcaaccgtacattggccatctctcttcctcgtgcttgcaaa 399

                                                                       
Query: 454 atgcctggtgtccca-gttcaatgcaaagcctctggttccccacttcctgctccaggacc 512
            |||||||||| |||  ||||||||||| | |||||||| || |||||||||||||||||
Sbjct: 400 ttgcctggtgttccactttcaatgcaaaacttctggttcacctcttcctgctccaggacc 459

                         
Query: 513 ggggtctcttggac 526
            |  ||||||||||
Sbjct: 460 agcatctcttggac 473



 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 683 catcttcatctacaggaagtggccgctccaatctgactccatcatctgc 731
           |||||||| | || |||||||||||||| |||||||| |||||||||||
Sbjct: 603 catcttcaaccacgggaagtggccgctctaatctgaccccatcatctgc 651