Miyakogusa Predicted Gene
- Lj1g3v0099440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0099440.1 Non Chatacterized Hit- tr|C5X1I3|C5X1I3_SORBI
Putative uncharacterized protein Sb01g021730
OS=Sorghu,42.06,1e-18,DUF581,Protein of unknown function DUF581;
seg,NULL,NODE_16964_length_1430_cov_156.974823.path2.1
(888 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79221 similar to UniRef100_A7NWQ3 Cluster: Chromosome... 1667 0.0
gnl|LJGI|GO009755 similar to UniRef100_A7NWQ3 Cluster: Chromosom... 749 0.0
gnl|LJGI|TC67086 similar to UniRef100_A7NWQ3 Cluster: Chromosome... 729 0.0
gnl|LJGI|TC61961 similar to UniRef100_A7NV17 Cluster: Chromosome... 60 2e-08
>gnl|LJGI|TC79221 similar to UniRef100_A7NWQ3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (61%)
Length = 1476
Score = 1667 bits (841), Expect = 0.0
Identities = 879/889 (98%), Gaps = 2/889 (0%)
Strand = Plus / Plus
Query: 1 atgacagattctgggtcttcatcatctccagctgaaaatcacaggaaatctggttcttct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 248 atgacagattctgggtcttcatcatctccaactgaaaatcacaggaaatctggttcttct 307
Query: 61 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 367
Query: 121 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 427
Query: 181 ttctggtgtgaatcaaacagccccagaacaccaggggg-tggtgaagtcaagcgttgctg 239
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 428 ttctggcgtgaatcaaacagccccagaacaccaggggggtggtgaagtcaagcgttgctg 487
Query: 240 ggagaatttggactccaaaggtgttggtcttggccttgttgatgctcttgttgatgatca 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 488 ggagaacttggactccaaaggtgttggtcttggccttgttgatgctcttgttgatgacca 547
Query: 300 caaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 caaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagct 607
Query: 360 gaagattcagattcctcctctaacacccacaccaactttttccagtgctgattttgccat 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 608 gaagattcagattcctcctctaacacccacaccaactttt-ccagtgctgattttgccat 666
Query: 420 caagacgaggaattctcagttggattcttcatctggaagcttttcactgtctcctatggg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 caagacgaggaattctcagttggattcttcatctggaagcttttcactgtctcctatggg 726
Query: 480 gaaatatccatatgggtgtgccaatactcatcaagtcttcactgggtgtctcgctgctag 539
||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 727 gaaatatccatctgggtgtgccaattctcatcaagtcttcactgggtgtctctctgctag 786
Query: 540 tgaaatggagctctctgaggactacactcgtgtgacttcgcatggtcctaacccgagaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgaaatggagctctctgaggactacactcgtgtgacttcgcatggtcctaacccgagaac 846
Query: 600 tactcacatatttgataattgcatcattgggagtagttgctttggtgctggatcatgctc 659
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 847 tactcacatatttgataattgcatcattgggggtagttgctttggtgctggatcatgctc 906
Query: 660 tgctgcttctgccatggaaaatgggtgttttcctcatcacacaagctattatccatctga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tgctgcttctgccatggaaaatgggtgttttcctcatcacacaagctattatccatctga 966
Query: 720 gagctttctcagcaactgcttttactgcaaaaagaatcttggccagggtaaagacatcta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 gagctttctcagcaactgcttttactgcaaaaagaatcttggccagggtaaagacatcta 1026
Query: 780 catgtacaggggtgagagggcattttgcagccatgaatgccgttaccaggggatgctgtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 catgtacaggggtgagagggcattttgcagccatgaatgccgttaccaggggatgctgtt 1086
Query: 840 ggaggaagggatgagcaaattggaagctgaggatttttatatgacttag 888
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 ggaggaagggatgagcaaattggaagctgaggatttttatatgacttag 1135
>gnl|LJGI|GO009755 similar to UniRef100_A7NWQ3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 622
Score = 749 bits (378), Expect = 0.0
Identities = 391/394 (99%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 1 atgacagattctgggtcttcatcatctccagctgaaaatcacaggaaatctggttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgacagattctgggtcttcatcatctccagctgaaaatcacaggaaatctggttcttct 289
Query: 61 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 349
Query: 121 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 409
Query: 181 ttctggtgtgaatcaaacagccccagaacaccagggggtggtgaagtcaagcgttgctgg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 410 ttctggtgtgaatcaaacagccccagaacaccagggggtggtgaggtcaagcgttgctgg 469
Query: 241 gagaatttggactccaaaggtgttggtcttggccttgttgatgctcttgttgatgatcac 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 gagaatttggactccaaaggtgttggtcttggcctcgttgatgctcttgttgatgatcac 529
Query: 301 aaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagctg 589
Query: 361 aagattcagattcctcctctaacacccacaccaa 394
|||||||||||||||||||| |||||||||||||
Sbjct: 590 aagattcagattcctcctct-acacccacaccaa 622
>gnl|LJGI|TC67086 similar to UniRef100_A7NWQ3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 715
Score = 729 bits (368), Expect = 0.0
Identities = 396/400 (99%), Gaps = 4/400 (1%)
Strand = Plus / Plus
Query: 1 atgacagattctgggtcttcatcatctccagctgaaaatcacaggaaatctggttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgacagattctgggtcttcatcatctccagctgaaaatcacaggaaatctggttcttct 377
Query: 61 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcttcaattctccaaggttgttcactaatctgtcaccaaaaagtttcaatgaagctgaa 437
Query: 121 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actatgatgagtcctacttccatactcgacagcaaaccattctctgggttgaagaacccg 497
Query: 181 ttctggtgtgaatcaaacagccccagaacacca-gggggtggtgaagtcaagcgttgctg 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 498 ttctggtgtgaatcaaacagccccagaacaccaggggggtggtgaagtcaagcgttgctg 557
Query: 240 ggagaatttggactccaaaggtgttggtcttggccttgttgatgctcttgttgatgatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggagaatttggactccaaaggtgttggtcttggccttgttgatgctcttgttgatgatca 617
Query: 300 caaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caaacatggtgaagtgaattcaaaatctgagagcagaatggttctgtttggatctcagct 677
Query: 360 gaagattcagattcctcctctaacacccacaccaactttt 399
| ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 678 g-agattcagattcctcctct-aca-ccacaccaactttt 714
>gnl|LJGI|TC61961 similar to UniRef100_A7NV17 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 753
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 772 gacatctacatgtacaggggtgagagggcattttgcag 809
||||||||||||||||||||||| || |||||||||||
Sbjct: 485 gacatctacatgtacaggggtgatagtgcattttgcag 522