Miyakogusa Predicted Gene

Lj1g3v0095180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0095180.1 Non Chatacterized Hit- tr|A9PBB2|A9PBB2_POPTR
Putative uncharacterized protein OS=Populus trichocarp,59.38,0.000002,
,NODE_12946_length_516_cov_849.988342.path1.1
         (181 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64949 similar to UniRef100_A7NWN2 Cluster: Chromosome...   359   4e-99
gnl|LJGI|TC64145 similar to UniRef100_A1YL93 Cluster: Proline-ri...   351   9e-97
gnl|LJGI|BW600234 similar to UniRef100_A1YL93 Cluster: Proline-r...    62   1e-09

>gnl|LJGI|TC64949 similar to UniRef100_A7NWN2 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (60%)
          Length = 1541

 Score =  359 bits (181), Expect = 4e-99
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatggtaaccactgatatgatgaccttgatcccatttacttttcgaatgttgtttgta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 atgatggtaaccactgatatgatgaccttgatcccatttacttttcgaatgttgtttgta 1273

                                                                        
Query: 61   atcactaaccgtttaacggtagcagttctgttgtgtgttaattataactactgtctctgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 atcactaaccgtttaacggtagcagttctgttgtgtgttaattataactactgtctctgc 1333

                                                                        
Query: 121  atggggagaagttgtatttctaatgttgatcccttagtactaggtgattatggaaagtaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 atggggagaagttgtatttctaatgttgatcccttagtactaggtgattatggaaagtaa 1393

             
Query: 181  c 181
            |
Sbjct: 1394 c 1394


>gnl|LJGI|TC64145 similar to UniRef100_A1YL93 Cluster: Proline-rich protein; n=1;
           Gossypium hirsutum|Rep: Proline-rich protein - Gossypium
           hirsutum (Upland cotton) (Gossypium mexicanum), partial
           (12%)
          Length = 800

 Score =  351 bits (177), Expect = 9e-97
 Identities = 180/181 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggtaaccactgatatgatgaccttgatcccatttacttttcgaatgttgtttgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atgatggtaaccactgatatgatgaccttgatcccatttacttttcgaatgttgtttgta 633

                                                                       
Query: 61  atcactaaccgtttaacggtagcagttctgttgtgtgttaattataactactgtctctgc 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 634 atcactaaccgtttaacggtagcaattctgttgtgtgttaattataactactgtctctgc 693

                                                                       
Query: 121 atggggagaagttgtatttctaatgttgatcccttagtactaggtgattatggaaagtaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atggggagaagttgtatttctaatgttgatcccttagtactaggtgattatggaaagtaa 753

            
Query: 181 c 181
           |
Sbjct: 754 c 754


>gnl|LJGI|BW600234 similar to UniRef100_A1YL93 Cluster: Proline-rich protein; n=1;
           Gossypium hirsutum|Rep: Proline-rich protein - Gossypium
           hirsutum (Upland cotton) (Gossypium mexicanum), partial
           (45%)
          Length = 504

 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 1   atgatggtaaccactgatatgatgaccttga 31
           |||||||||||||||||||||||||||||||
Sbjct: 474 atgatggtaaccactgatatgatgaccttga 504