Miyakogusa Predicted Gene

Lj1g3v0084880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0084880.1 Non Chatacterized Hit- tr|I3S562|I3S562_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,45,1e-18,seg,NULL; coiled-coil,NULL; Translational machinery
components,NULL; STRUCTURAL CONSTITUENT OF RIBOS,CUFF.25193.1
         (1044 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025898 similar to UniRef100_A7PBM4 Cluster: Chromosom...   805   0.0  

>gnl|LJGI|GO025898 similar to UniRef100_A7PBM4 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 770

 Score =  805 bits (406), Expect = 0.0
 Identities = 419/422 (99%), Gaps = 1/422 (0%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccaacactcgctcttgaggacactcaatctctgcttcaagtccctttccaccaccattcc 101
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccaacactcgctcttgaggacactcaatctctgcttcaagtccctttccaccaccattcc 344

                                                                       
Query: 102 tgataataaggacgatgaggctgccgtgagctctccctctgtgccaccttctgaatgttc 161
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 345 tgataataaggacgatgaggctgccgtgagctccccctctgtgccaccttctgaatgttc 404

                                                                       
Query: 162 tagtagccttcatatttccccatttttctcccaattcaatcatcccactagtggatttga 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tagtagccttcatatttccccatttttctcccaattcaatcatcccactagtggatttga 464

                                                                       
Query: 222 tatcgaacttgtggatcgtgatgcttgggggatctcatctggggtggcacaagcctggcg 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tatcgaacttgtggatcgtgatgcttgggggatctcatctggggtggcacaagcctggcg 524

                                                                       
Query: 282 cgctgcttcagaagctagttctgctgataagcaagcgaccagtgaagaccagcgacagaa 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cgctgcttcagaagctagttctgctgataagcaagcgaccagtgaagaccagcgacagaa 584

                                                                       
Query: 342 tgaggttgagggtgaacttgattttgaagagttagacaacatgagaattcgtggcaatct 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgaggttgagggtgaacttgattttgaagagttagacaacatgagaattcgtggcaatct 644

                                                                       
Query: 402 gttctttaagcttgagcgcagttccaaggagtttgaagagtataatttagagtttcatca 461
           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 645 gttctttaagcttgagcgcag-tcccaggagtttgaagagtataatttagagtttcatca 703

             
Query: 462 ga 463
           ||
Sbjct: 704 ga 705