Miyakogusa Predicted Gene
- Lj1g3v0052650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0052650.1 Non Chatacterized Hit- tr|I1LFS4|I1LFS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49548
PE,85.31,0,SNF2_N,SNF2-related; Helicase_C,Helicase, C-terminal; no
description,NULL; SWI/SNF-RELATED MATRIX-AS,CUFF.25170.1
(3222 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome... 2296 0.0
gnl|LJGI|TC76370 similar to UniRef100_A7NWI8 Cluster: Chromosome... 1287 0.0
gnl|LJGI|BP058110 295 9e-79
>gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 1459
Score = 2296 bits (1158), Expect = 0.0
Identities = 1205/1218 (98%), Gaps = 2/1218 (0%)
Strand = Plus / Plus
Query: 178 gatttgttggcagaccttcaagatgcactctccaaccaccgtgcctcctccgcctccaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatttgttggcagaccttcaagatgcactctccaaccaccgtgcctcctccgcctccaaa 301
Query: 238 ttagaccaagcaaccgaaacccgttatcaaactctcattcaacaccgcttaactcagctt 297
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 ttagaccaagcaaccgaaacccgttatcaaaccctcattcaacaccgcttaactcagctt 361
Query: 298 caagaattgccttccaccaggggagataacctacagacaacttgcctgcttgagttttat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caagaattgccttccaccaggggagataacctacagacaacttgcctgcttgagttttat 421
Query: 358 ggtctaaagctggcagagttgcagaggaaggttcggactgacgtcagctctgaatactgg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtctaaagctggcagagttgcagaggaaggttcggactgacgtcagctctgaatactgg 481
Query: 418 ctccgcgttcagtgtgcgtgtcccgacaaacaattgtatgattggggcatgatgcggttg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctccgcgttcagtgtgcgtgtcccgacaaacaattgtatgattggggcatgatgcggttg 541
Query: 478 cgccgcccaccgtatggtgttggagatccgtttgccatggatgctgatgatcaa-ataag 536
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 542 cgccgcccaccgtatggtgttggagatccgttggccatggatgctgatgatcaagataag 601
Query: 537 gaagaaacgggatgctgagagactatcaagattagaagagcagacaaagaatcacataga 596
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 gaagaaacgggatgctgagagactatcaagataagaagagcagacaaagaatcacataga 661
Query: 597 gaccagaaaaagaagattttttgcagaaatattgaatgctgtccgcgagttccagttaca 656
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaccagaaaaagaagattgtaagcagaaatattgaatgctgtccgcgagttccagttaca 721
Query: 657 aattcaagcttctttgaagcggagaaaacagaggaatgacggtgtccaggcatggcatgg 716
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aattcaagcttcttggaagcggagaaaacagaggaatgacggtgtccaggcatggcatgg 781
Query: 717 aaggcaaagacaacgtgcaacccgggctgagaaattgagattccaagctttaaagtccga 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaggcaaagacaacgtgcaacccgggctgagaaattgagattccaagctttaaagtccga 841
Query: 777 tgatcaggaagcttacatgagaatggtgaaagagagtaagaatgaaagattgactttact 836
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 842 tgatcaggaagcttacatgagaatggtgaaagagagtaagaatgagagattgactttact 901
Query: 837 tcttgaagaaacaaataaactgcttgtaaatttgggagcagctgttcaacgtcaaaggga 896
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 902 tcttgaagaaacaaataaactgcttgtaaattagggagcagctgttcaacgtcaaaggga 961
Query: 897 ctccaaaaaatctgatggtattgaacccttggaagatttagaagctgatttaccggagtc 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ctccaaaaaatctgatggtattgaacccttggaagatttagaagctgatttaccggagtc 1021
Query: 957 agatgccttgaa-gaataaggactcgcctcttgatgaagatgtggatttgatagactctg 1015
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1022 agatgccttgaaagaataaggactcgcctcttgatgaagatgtggattagatagactctg 1081
Query: 1016 attataatggtgacactagtgatttacttgaaggtcagcggcaatacaattctgccatac 1075
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atgataatggtgacactagtgatttacttgaaggtcagcggcaatacaattctgccatac 1141
Query: 1076 actcaattcaagaaaaggtaactgagcagccatccatccttcaaggtggagaattaagat 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 actcaattcaagaaaaggtaactgagcagccatccatccttcaaggtggagaattaagat 1201
Query: 1136 cttaccagatagaagggctccagtggatgctttctttgtttaataacaacttgaatggaa 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 cttaccagatagaagggctccagtggatgctttctttgtttaataacaacttgaatggaa 1261
Query: 1196 ttttggctgatgaaatgggacttgggaagacaatacaaaccatttcgttgatagcacatc 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 ttttggctgatgaaatgggacttgggaagacaatacaaaccatttcgttgatagcacatc 1321
Query: 1256 ttatggaatacaagggtgtgactggacctcacttgatagtggctccaaaggctgttctgc 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 ttatggaatacaagggtgtgactggacctcacttgatagtggctccaaaggctgttctgc 1381
Query: 1316 caaattggatgaatgaattctcaacctgggctccaagcatcaaaactattctttatgatg 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 caaattggatgaatgaattctcaacctgggctccaagcatcaaaactattctttatgatg 1441
Query: 1376 gacggatggatgagagga 1393
||||||||||||||||||
Sbjct: 1442 gacggatggatgagagga 1459
Score = 198 bits (100), Expect = 2e-49
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 atggaggagcaagcattgattggagcgctgaacctgatatctcgcaaccttcctcttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggaggagcaagcattgattggagcgctgaacctgatatctcgcaaccttcctcttccc 124
Query: 61 cctgacctcttcaccaccgtttcatccatttatcaccgat 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cctgacctcttcaccaccgtttcatccatttatcaccgat 164
>gnl|LJGI|TC76370 similar to UniRef100_A7NWI8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 861
Score = 1287 bits (649), Expect = 0.0
Identities = 668/677 (98%)
Strand = Plus / Plus
Query: 2546 acagaagagaaatgttggaggtgatcatgcgtagaggtactagctcacttgggacagatg 2605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagaagagaaatgttggaggtgatcatgcgtagaggtactagctcacttgggacagatg 60
Query: 2606 tgccaagcgagagagaaattaatcgccttgcagcccgatctgatgaggaattttggctgt 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccaagcgagagagaaattaatcgccttgcagcccgatctgatgaggaattttggctgt 120
Query: 2666 ttgagagaatggatgaagagagaaggctaaaggagaattacagatctcgtctcatggaag 2725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagagaatggatgaagagagaaggctaaaggagaattacagatctcgtctcatggaag 180
Query: 2726 agcatgaagtgccagattgggtatactctgcactaaataaggatgagaaggtcaaagctt 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcatgaagtgccagattgggtatactctgcactaaataaggatgagaaggtcaaagctt 240
Query: 2786 ttgatagtggtagtgtcagtggaaagcggaaaaggaaagaagtggtatatgctgatacat 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgatagtggtagtgtcagtggaaagcggaaaaggaaagaagtggtatatgctgatacat 300
Query: 2846 taagtgatctacaatggatgaaggctgtggagagcgcacaagacatgcctaagctttcag 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagtgatctacaatggatgaaggctgtggagagcgcacaagacatgcctaagctttcag 360
Query: 2906 ttaaaaggaagaggagagacagcgatgcacaggccagtgatgatattggggcagaagaaa 2965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaaaaggaagaggagagacagcgatgcacaggccagtgatgatattggggcagaagaaa 420
Query: 2966 ggttattagagttaagaaatggaagtgagagatccagtgaggatactttcaatgtgaccc 3025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttattagagttaagaaatggaagtgagagatccagtgaggatactttcaatgtgaccc 480
Query: 3026 ctgcctctaagaggcccaagcatgaagaactaaattcccagaatcatgaaaacgaggacg 3085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgcctctaagaggcccaagcatgaagaactaaattcccagaatcatgaaaacgaggacg 540
Query: 3086 taagagtaggtggtttgaacgagaatgtgttttcctggaatactnnnnnnnngaagagat 3145
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 541 taagagtaggtggtttgaacgagaatgtgttttcctggaatactaaaaaaaagaagagat 600
Query: 3146 caagctatcttagccagggttcattatctgatactaaagggcagaattcaaatggaagag 3205
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caagctattttagccagggttcattatctgatactaaagggcagaattcaaatggaagag 660
Query: 3206 caaacaggaactgatcg 3222
|||||||||||||||||
Sbjct: 661 caaacaggaactgatcg 677
>gnl|LJGI|BP058110
Length = 483
Score = 295 bits (149), Expect = 9e-79
Identities = 207/229 (90%)
Strand = Plus / Minus
Query: 2994 gagatccagtgaggatactttcaatgtgacccctgcctctaagaggcccaagcatgaaga 3053
||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||
Sbjct: 483 gagatcccgtgaggatactttccatgtgacccctgcctctaagaggccccagcctgaaga 424
Query: 3054 actaaattcccagaatcatgaaaacgaggacgtaagagtaggtggtttgaacgagaatgt 3113
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 423 actaaattccccgaatcatggaaacgaggacgtaagagtaggtggtttgaacgagaatgt 364
Query: 3114 gttttcctggaatactnnnnnnnngaagagatcaagctatcttagccagggttcattatc 3173
|||||||||| ||||| ||||||||| ||||||||||||| |||||| |||||
Sbjct: 363 gttttcctgggatactaaaaaaaagaagagatccagctatcttagcccgggttccttatc 304
Query: 3174 tgatactaaagggcagaattcaaatggaagagcaaacaggaactgatcg 3222
|||||||||||||| |||||| ||||||||||| ||| |||||||||||
Sbjct: 303 tgatactaaagggccgaattccaatggaagagccaaccggaactgatcg 255