Miyakogusa Predicted Gene

Lj1g3v0052310.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0052310.1 Non Chatacterized Hit- tr|B7FMX2|B7FMX2_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,81.48,2e-18,seg,NULL; coiled-coil,NULL,CUFF.25159.1
         (1546 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323833 similar to UniRef100_A7QH25 Cluster: Chromosom...  1176   0.0  
gnl|LJGI|TC70143                                                     1021   0.0  

>gnl|LJGI|FS323833 similar to UniRef100_A7QH25 Cluster: Chromosome chr3 scaffold_95,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_95, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 724

 Score = 1176 bits (593), Expect = 0.0
 Identities = 593/593 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcaaaaggtcatcaagtaggaaccaaaggtccaaaggcatcaaggtcaagcatgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgatcaaaaggtcatcaagtaggaaccaaaggtccaaaggcatcaaggtcaagcatgtt 191

                                                                       
Query: 61  ctgcagattattctgttgcttggtgtttgcttctggttgatctatcaggttaagcgctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ctgcagattattctgttgcttggtgtttgcttctggttgatctatcaggttaagcgctct 251

                                                                       
Query: 121 catgataagaagaaggaatttgatcagactgatgccaaagggtcagttgtaactcagaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 catgataagaagaaggaatttgatcagactgatgccaaagggtcagttgtaactcagaat 311

                                                                       
Query: 181 gcctatcagactccaaaaattcacgctagaaaatttcttccggatgaggacaaagtaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcctatcagactccaaaaattcacgctagaaaatttcttccggatgaggacaaagtaaat 371

                                                                       
Query: 241 caagatgaaaagcacagggaagaagaggaagatgagactattgtagaggatgaagataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caagatgaaaagcacagggaagaagaggaagatgagactattgtagaggatgaagataag 431

                                                                       
Query: 301 cttgaacatgaagaagaaagaaatgatcatgagagtgaacaaaaacctggactcagagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cttgaacatgaagaagaaagaaatgatcatgagagtgaacaaaaacctggactcagagga 491

                                                                       
Query: 361 gcaggagaagaccaagcggaagatgaaaacaaaagcgaagagacggaagacgaaagaggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcaggagaagaccaagcggaagatgaaaacaaaagcgaagagacggaagacgaaagaggg 551

                                                                       
Query: 421 gccggagatgatgagatagatgaaaatgatcaagacaaaccagatgtggatgctgaccgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gccggagatgatgagatagatgaaaatgatcaagacaaaccagatgtggatgctgaccgt 611

                                                                       
Query: 481 gatgacgagttcatggaggaagacaaagaaggggatgacgagaaggaggggagtgaagac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gatgacgagttcatggaggaagacaaagaaggggatgacgagaaggaggggagtgaagac 671

                                                                
Query: 541 agtgaagatgaaggaaaggaggcttcacttgaaaaccacaacagtcatgaggc 593
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agtgaagatgaaggaaaggaggcttcacttgaaaaccacaacagtcatgaggc 724


>gnl|LJGI|TC70143 
          Length = 689

 Score = 1021 bits (515), Expect = 0.0
 Identities = 515/515 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1032 atcaagcctggctcagaatggaactgtgaacataacagtcactgaggatgcaaaaaatgt 1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atcaagcctggctcagaatggaactgtgaacataacagtcactgaggatgcaaaaaatgt 60

                                                                        
Query: 1092 gcagacagagggattcgagcaggttggaaatagcatctctgaagaaaaccgtccaatttc 1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gcagacagagggattcgagcaggttggaaatagcatctctgaagaaaaccgtccaatttc 120

                                                                        
Query: 1152 taactcaacagtccctgtcaaaacagaaaacggagctgcatctggagctgattcttctaa 1211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  taactcaacagtccctgtcaaaacagaaaacggagctgcatctggagctgattcttctaa 180

                                                                        
Query: 1212 tgtagagggtggtgacatagataaggcaaccagatttgtagcgtataatgagacggagaa 1271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgtagagggtggtgacatagataaggcaaccagatttgtagcgtataatgagacggagaa 240

                                                                        
Query: 1272 caagggtaactctgaaatgagtgaaataagtaagactcagaataattcttatgtgaagga 1331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  caagggtaactctgaaatgagtgaaataagtaagactcagaataattcttatgtgaagga 300

                                                                        
Query: 1332 gaacaccggtgccactaaggacgaggagttcaacttcaagggcaccacgcaaatatcaga 1391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaacaccggtgccactaaggacgaggagttcaacttcaagggcaccacgcaaatatcaga 360

                                                                        
Query: 1392 ctcatcctctgcgaatggaacttttgattcagttgaacatcatgtcactgattctctcat 1451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctcatcctctgcgaatggaacttttgattcagttgaacatcatgtcactgattctctcat 420

                                                                        
Query: 1452 cctgaaggaagtgacagaggtccgaactgatcctgataggttgccagatattagaaatgt 1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  cctgaaggaagtgacagaggtccgaactgatcctgataggttgccagatattagaaatgt 480

                                               
Query: 1512 aggagataatggtgatgcagctgcaacaacctaaa 1546
            |||||||||||||||||||||||||||||||||||
Sbjct: 481  aggagataatggtgatgcagctgcaacaacctaaa 515