Miyakogusa Predicted Gene
- Lj1g3v0050950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0050950.1 Non Chatacterized Hit- tr|I1LFP0|I1LFP0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45391
PE,76.13,0,PPR,Pentatricopeptide repeat; HCP-like,NULL; seg,NULL; no
description,Tetratricopeptide-like helical,CUFF.25133.1
(2351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO035880 similar to UniRef100_A7QW79 Cluster: Chromosom... 464 e-129
gnl|LJGI|BP043127 76 1e-12
>gnl|LJGI|GO035880 similar to UniRef100_A7QW79 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 686
Score = 464 bits (234), Expect = e-129
Identities = 492/578 (85%)
Strand = Plus / Plus
Query: 1126 gcaggatgcaaacctaatatttgcacttttaatgctcttattaagatgcatggtaacagg 1185
||||| |||||||||||||| ||||| || ||||| ||||| |||||| |||| || |
Sbjct: 7 gcaggctgcaaacctaatatatgcaccttcaatgcccttatcaagatgtatggagaccga 66
Query: 1186 ggaaagtttgccgaaatgatgaaagtctttgaggagatcaaggtatgcgggtgttcccct 1245
|| | |||||| |||||| |||||| ||| |||||||||||| |||| ||||||||||
Sbjct: 67 gggatgtttgcggaaatggggaaagtttttaaggagatcaaggcatgccagtgttcccct 126
Query: 1246 gatattgttacttggaactcccttttggccgtgttcggacaaaatggaatggactctgaa 1305
|||||||||||||||||| | |||||||| || || |||||||||||| |||||||||||
Sbjct: 127 gatattgttacttggaacacacttttggctgtatttggacaaaatggattggactctgaa 186
Query: 1306 gtatcaggagttttcaaagaaatgaagagatcagggtttgtacccgatagggacaccttc 1365
||||||||||| |||||||||||||||||| | |||||||| || || ||||| || |||
Sbjct: 187 gtatcaggagtgttcaaagaaatgaagagagccgggtttgtgccggagagggagacattc 246
Query: 1366 aacaccctcataagtgcttacagcaggtgtggttccttggatcaagcaatagctatttac 1425
||||| || ||||| || |||||||||||||||||||| || ||||| | ||| ||||
Sbjct: 247 aacactctaataagcgcatacagcaggtgtggttcctttgaccaagctagggctgtttat 306
Query: 1426 aagagtatgctggaagctggagttactccagatctctccacctataatgctgttttggca 1485
||||| |||||||| |||||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 307 aagagaatgctggaggctggagtgactccagatctttcaacttataatgctgttttagca 366
Query: 1486 gcattggctcgaggagggtattgggaacaatctgaaaaagtccttgctgaaatgaaggat 1545
|||||||||||||||||| ||||||||||||||| ||||||||| ||||||| || ||
Sbjct: 367 gcattggctcgaggagggctttgggaacaatctgagaaagtccttagtgaaatggagaat 426
Query: 1546 cgtcggtgtaaacctgatgagataacattctcttctttgcttcatgcctatgccaatgct 1605
|||| ||||||||| ||||| |||||| |||||||||||||||||| ||||||||||
Sbjct: 427 ggtcgatgtaaacctaatgaggtaacatactcttctttgcttcatgcttatgccaatggc 486
Query: 1606 aaggagattgataggatgactgcttttgctgaggagatatactcgggttctatagaagca 1665
|| ||| |||| | ||||| |||| |||| |||||||||||||| || || | ||
Sbjct: 487 aaagagtttgaaaagatgaatgctcttgcagaggagatatactctggaaaaattacaaca 546
Query: 1666 aatgctgttctgttgaagacccttgttctagtaaatag 1703
|||||||||| ||||||||||||||||||||||||||
Sbjct: 547 catgctgttcttttgaagacccttgttctagtaaatag 584
>gnl|LJGI|BP043127
Length = 466
Score = 75.8 bits (38), Expect = 1e-12
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 2314 aggttactagatagaatagttagggaatggccataagt 2351
||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aggttactagatagaatagttagggaatggccataagt 429