Miyakogusa Predicted Gene
- Lj1g3v0047810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0047810.1 Non Chatacterized Hit- tr|I1JB03|I1JB03_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.06,0,Pseudouridine
synthase,Pseudouridine synthase, catalytic domain;
PseudoU_synth_2,Pseudouridine
synth,NODE_53752_length_1380_cov_34.390579.path2.1
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW631256 similar to UniRef100_A9EHL2 Cluster: Ribosomal... 918 0.0
gnl|LJGI|TC78565 similar to UniRef100_A7P9Q6 Cluster: Chromosome... 862 0.0
gnl|LJGI|TC75761 UniRef100_A7P9Q6 Cluster: Chromosome chr3 scaff... 745 0.0
>gnl|LJGI|BW631256 similar to UniRef100_A9EHL2 Cluster: Ribosomal large subunit
pseudouridine synthase C; n=2; Phaeobacter
gallaeciensis|Rep: Ribosomal large subunit pseudouridine
synthase C - Phaeobacter gallaeciensis 2.10, partial
(6%)
Length = 488
Score = 918 bits (463), Expect = 0.0
Identities = 466/467 (99%)
Strand = Plus / Plus
Query: 1 atggcggcgaaagccatcgtcctccgcgtcggagtcttgaggtcatggaggagtcgtcac 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 22 atggcggcgaaagccatcgtcctcctcgtcggagtcttgaggtcatggaggagtcgtcac 81
Query: 61 ttctccgcgaccagtgagcaggatgccaaagccaaatggcatactctgccgcccgtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ttctccgcgaccagtgagcaggatgccaaagccaaatggcatactctgccgcccgtcact 141
Query: 121 gccactgtgaaggggcaagggaaccaagtctcctcctccacttccaccactgcgctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gccactgtgaaggggcaagggaaccaagtctcctcctccacttccaccactgcgctcaaa 201
Query: 181 tgggttcttcgctgctgccccaacctacctagaacccttgttcacaagctctttcgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgggttcttcgctgctgccccaacctacctagaacccttgttcacaagctctttcgtcta 261
Query: 241 agacaggttcgagtggccatacaagataacagactcaaaagggtgacagccaaggatacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agacaggttcgagtggccatacaagataacagactcaaaagggtgacagccaaggatacc 321
Query: 301 ttgaactcaggagattgcatcgttcttcctcattctgttaaagaaatccctatccctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgaactcaggagattgcatcgttcttcctcattctgttaaagaaatccctatccctaaa 381
Query: 361 cagcagcaacttgagtgtcacaccactgccaaagaaatcagtttcatccgcagtcttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cagcagcaacttgagtgtcacaccactgccaaagaaatcagtttcatccgcagtcttgtt 441
Query: 421 atctataaggatcctgccattcttgtcctcaacaaacctccaggaat 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atctataaggatcctgccattcttgtcctcaacaaacctccaggaat 488
>gnl|LJGI|TC78565 similar to UniRef100_A7P9Q6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 496
Score = 862 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 452 acaaacctccaggaatgccagttcagggtggcattgatatcaaacggagcttagatgtag 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaaacctccaggaatgccagttcagggtggcattgatatcaaacggagcttagatgtag 60
Query: 512 tagctgcatcatgtttaaagtatgaatactcagaaccccctcgtctggtgcatagactgg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagctgcatcatgtttaaagtatgaatactcagaaccccctcgtctggtgcatagactgg 120
Query: 572 acagagactgttctggcattttggtgatgggaaggacacagacaagtgctacagttctgc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acagagactgttctggcattttggtgatgggaaggacacagacaagtgctacagttctgc 180
Query: 632 attccatcttccgggaaaaaacttccagtgcttcagatgatcttggcacagaaaatagag 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attccatcttccgggaaaaaacttccagtgcttcagatgatcttggcacagaaaatagag 240
Query: 692 tcctacaaagaaagtacagggcattggtcattggatgccctagacgcccaagggggttgg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcctacaaagaaagtacagggcattggtcattggatgccctagacgcccaagggggttgg 300
Query: 752 ttactgcttcactgggtaaggtggtggttgacaatggaaaatccgatcgaataactattg 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttactgcttcactgggtaaggtggtggttgacaatggaaaatccgatcgaataactattg 360
Query: 812 ttgacaattcttcgttgctgtcatcacaacatgcaattacagagtaccgagtgattggat 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgacaattcttcgttgctgtcatcacaacatgcaattacagagtaccgagtgattggat 420
Query: 872 catcatcacacggtt 886
|||||||||||||||
Sbjct: 421 catcatcacacggtt 435
>gnl|LJGI|TC75761 UniRef100_A7P9Q6 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (9%)
Length = 802
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 915 tggcagaaaacaccagcttcgagtccactgtgctgaggtgttaggtacaccaatagttgg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggcagaaaacaccagcttcgagtccactgtgctgaggtgttaggtacaccaatagttgg 341
Query: 975 agactacaagtatggatggcaagctcacaggaagtggagtcattttgatttgtctgatgt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agactacaagtatggatggcaagctcacaggaagtggagtcattttgatttgtctgatgt 401
Query: 1035 ggaagagtcgagtgaagagcttctcaaagaagagacactcccctttggccttaatttgaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggaagagtcgagtgaagagcttctcaaagaagagacactcccctttggccttaatttgaa 461
Query: 1095 caagggaagcatcaatgagaagcaaccccgtttacatctccattgcaagcaaatagtttt 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 caagggaagcatcaatgagaagcaaccccgtttacatctccattgcaagcaaatagtttt 521
Query: 1155 gcccgatatatctcaagcactgaagcatgtgcaatcagattcgagttatgacctttcaca 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcccgatatatctcaagcactgaagcatgtgcaatcagattcgagttatgacctttcaca 581
Query: 1215 agtgaaagcacttgagttggtcgcggctatgcctccatacatgcgaaggagttgggatgt 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agtgaaagcacttgagttggtcgcggctatgcctccatacatgcgaaggagttgggatgt 641
Query: 1275 catgaattcttcttga 1290
||||||||||||||||
Sbjct: 642 catgaattcttcttga 657
Score = 509 bits (257), Expect = e-143
Identities = 257/257 (100%)
Strand = Plus / Plus
Query: 1 atggcggcgaaagccatcgtcctccgcgtcggagtcttgaggtcatggaggagtcgtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggcggcgaaagccatcgtcctccgcgtcggagtcttgaggtcatggaggagtcgtcac 88
Query: 61 ttctccgcgaccagtgagcaggatgccaaagccaaatggcatactctgccgcccgtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttctccgcgaccagtgagcaggatgccaaagccaaatggcatactctgccgcccgtcact 148
Query: 121 gccactgtgaaggggcaagggaaccaagtctcctcctccacttccaccactgcgctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gccactgtgaaggggcaagggaaccaagtctcctcctccacttccaccactgcgctcaaa 208
Query: 181 tgggttcttcgctgctgccccaacctacctagaacccttgttcacaagctctttcgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tgggttcttcgctgctgccccaacctacctagaacccttgttcacaagctctttcgtcta 268
Query: 241 agacaggttcgagtggc 257
|||||||||||||||||
Sbjct: 269 agacaggttcgagtggc 285