Miyakogusa Predicted Gene

Lj1g3v0016520.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0016520.1 tr|B9HEY9|B9HEY9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217237
PE=3,36.36,7e-16, ,CUFF.25279.1
         (555 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63887 similar to UniRef100_UPI000034F553 Cluster: pro...   478   e-134
gnl|LJGI|FS321672 similar to UniRef100_A7NVJ2 Cluster: Chromosom...   319   1e-86
gnl|LJGI|FS332896 similar to UniRef100_A7NVJ2 Cluster: Chromosom...    98   7e-20
gnl|LJGI|TC61874 similar to UniRef100_A7QSU3 Cluster: Chromosome...    54   9e-07

>gnl|LJGI|TC63887 similar to UniRef100_UPI000034F553 Cluster: protein kinase family
           protein; n=1; Arabidopsis thaliana|Rep: protein kinase
           family protein - Arabidopsis thaliana, partial (18%)
          Length = 781

 Score =  478 bits (241), Expect = e-134
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 27  agataaattacatgatgatctaaatttctcaacgaaatcgttggtgccttatacaaagag 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agataaattacatgatgatctaaatttctcaacgaaatcgttggtgccttatacaaagag 600

                                                                       
Query: 87  aagaagggtgaagaattgtgaaacttgtgcattgcaagaggcttctgaatctgaatttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagaagggtgaagaattgtgaaacttgtgcattgcaagaggcttctgaatctgaatttga 660

                                                                       
Query: 147 gcaaggggttcctgaaaatccacttgctatggtaccatatcagaaacttgatggtgatga 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcaaggggttcctgaaaatccacttgctatggtaccatatcagaaacttgatggtgatga 720

                                                                       
Query: 207 tgatgcttgttcttattcaattacagtgggtgattctaaacagtcaaaacctggttggtc 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgatgcttgttcttattcaattacagtgggtgattctaaacagtcaaaacctggttggtc 780

            
Query: 267 a 267
           |
Sbjct: 781 a 781


>gnl|LJGI|FS321672 similar to UniRef100_A7NVJ2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 767

 Score =  319 bits (161), Expect = 1e-86
 Identities = 161/161 (100%)
 Strand = Plus / Plus

                                                                       
Query: 27  agataaattacatgatgatctaaatttctcaacgaaatcgttggtgccttatacaaagag 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agataaattacatgatgatctaaatttctcaacgaaatcgttggtgccttatacaaagag 666

                                                                       
Query: 87  aagaagggtgaagaattgtgaaacttgtgcattgcaagaggcttctgaatctgaatttga 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aagaagggtgaagaattgtgaaacttgtgcattgcaagaggcttctgaatctgaatttga 726

                                                    
Query: 147 gcaaggggttcctgaaaatccacttgctatggtaccatatc 187
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gcaaggggttcctgaaaatccacttgctatggtaccatatc 767


>gnl|LJGI|FS332896 similar to UniRef100_A7NVJ2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 733

 Score = 97.6 bits (49), Expect = 7e-20
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 27  agataaattacatgatgatctaaatttctcaacgaaatcgttggtgcct 75
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agataaattacatgatgatctaaatttctcaacgaaatcgttggtgcct 733


>gnl|LJGI|TC61874 similar to UniRef100_A7QSU3 Cluster: Chromosome chr4 scaffold_162,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_162, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (54%)
          Length = 1696

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 34/35 (97%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                              
Query: 521 tgatgggcttgcaagagaagtactcatcttcatgc 555
           ||||||||| |||||||||||||||||||||||||
Sbjct: 8   tgatgggct-gcaagagaagtactcatcttcatgc 41