Miyakogusa Predicted Gene

Lj1g3v0013230.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0013230.1 tr|O22512|O22512_SOYBN Grr1 OS=Glycine max
GN=grr1 PE=2 SV=1,46.05,0.00000000004,
,NODE_34412_length_216_cov_656.555542.path3.1
         (205 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68630 similar to UniRef100_A7P5T8 Cluster: Chromosome...   329   4e-90
gnl|LJGI|TC65412 similar to UniRef100_O22512 Cluster: Grr1; n=1;...    82   1e-15

>gnl|LJGI|TC68630 similar to UniRef100_A7P5T8 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 728

 Score =  329 bits (166), Expect = 4e-90
 Identities = 205/222 (92%), Gaps = 17/222 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatttttgccctggggggacaatatacacaaaccccaaggaagcaagtttcttcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgatttttgccctggggggacaatatacacaaaccccaaggaagcaagtttcttcctgt 333

                                                                       
Query: 61  ctcatggccttccagttgatgtatactttcctgctcggaaaaggtcacgaatcagtgctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctcatggccttccagttgatgtatactttcctgctcggaaaaggtcacgaatcagtgctc 393

                                                                       
Query: 121 c-----------------aatggttggagcagaagcaggagacatctattgaaactttgc 163
           |                 ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 catttgttttcagcagagaatggttggagcagaagcaggagacatctattgaaactttgc 453

                                                     
Query: 164 cagatgaatgcctgtttgaaatcttcaggaagttgccaggtg 205
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagatgaatgcctgtttgaaatcttcaggaagttgccaggtg 495


>gnl|LJGI|TC65412 similar to UniRef100_O22512 Cluster: Grr1; n=1; Glycine max|Rep:
           Grr1 - Glycine max (Soybean), partial (77%)
          Length = 1991

 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 130 gagcagaagcaggagacatctattgaaactttgccagatgaatgcctgtttgaaatc 186
           ||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||
Sbjct: 415 gagcaaaagcaggagacgtgtattgaaactttgccagatgaatgcctctttgaaatc 471