Miyakogusa Predicted Gene

Lj1g3v0003100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0003100.1 Non Chatacterized Hit- tr|F7HTZ3|F7HTZ3_CALJA
Uncharacterized protein OS=Callithrix jacchus
GN=LOC10,35.52,4e-19,UBC-like,Ubiquitin-conjugating enzyme/RWD-like;
no description,Ubiquitin-conjugating enzyme/RWD-like,CUFF.25108.1
         (540 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69010 similar to UniRef100_A7P6U8 Cluster: Chromosome...  1063   0.0  
gnl|LJGI|CB827777 homologue to UniRef100_Q38HU0 Cluster: RWD dom...   341   3e-93

>gnl|LJGI|TC69010 similar to UniRef100_A7P6U8 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1200

 Score = 1063 bits (536), Expect = 0.0
 Identities = 539/540 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacggactacgcgcaagaacaagaaatggagattgaagcattagaagctatacttatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgacggactacgcgcaagaacaagaaatggagattgaagcattagaagctatacttatg 209

                                                                       
Query: 61  gatgagttcaaagaaatacactctggtgaaagtggtctaagtacttccaatcggtgcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gatgagttcaaagaaatacactctggtgaaagtggtctaagtacttccaatcggtgcttt 269

                                                                       
Query: 121 caaataaagatagcacaggatgaggatggagatatgccaatcagctatccagctcaactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 caaataaagatagcacaggatgaggatggagatatgccaatcagctatccagctcaactg 329

                                                                       
Query: 181 ggtttgatcttcgcacacacagaaagatatcctgatgaacctccacttttaaatgttacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggtttgatcttcgcacacacagaaagatatcctgatgaacctccacttttaaatgttacg 389

                                                                       
Query: 241 agtttacaaggaatacctcctgaagatttaagggctgtgaaagaaaaacttcaacaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agtttacaaggaatacctcctgaagatttaagggctgtgaaagaaaaacttcaacaagag 449

                                                                       
Query: 301 gcatctgaaaatcttggtatggctatgatctacacactcgttacctcagctaaagagtgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gcatctgaaaatcttggtatggctatgatctacacactcgttacctcagctaaagagtgg 509

                                                                       
Query: 361 ttggatgagcggttttgtcaagactctggtgatgtgagtgctgaagcagaagaggcagcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttggatgagcggttttgtcaagactctggtgatgtgagtgctgaagcagaagaggcagcc 569

                                                                       
Query: 421 aaagaggatatagttgtaccccatggggaaccagttactgttgaaacatttttggcatgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaagaggatatagttgtaccccatggggaaccagttactgttgaaacatttttggcatgg 629

                                                                       
Query: 481 agggagaggtttgaagctgagctagcacttgaacgagccaagttaatgccagagtccgcg 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 630 agggagaggtttgaagctgagctagcacttgaacgagccaagttagtgccagagtccgcg 689


>gnl|LJGI|CB827777 homologue to UniRef100_Q38HU0 Cluster: RWD domain-containing
           protein; n=1; Solanum tuberosum|Rep: RWD
           domain-containing protein - Solanum tuberosum (Potato),
           partial (17%)
          Length = 545

 Score =  341 bits (172), Expect = 3e-93
 Identities = 172/172 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacggactacgcgcaagaacaagaaatggagattgaagcattagaagctatacttatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgacggactacgcgcaagaacaagaaatggagattgaagcattagaagctatacttatg 204

                                                                       
Query: 61  gatgagttcaaagaaatacactctggtgaaagtggtctaagtacttccaatcggtgcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gatgagttcaaagaaatacactctggtgaaagtggtctaagtacttccaatcggtgcttt 264

                                                               
Query: 121 caaataaagatagcacaggatgaggatggagatatgccaatcagctatccag 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaataaagatagcacaggatgaggatggagatatgccaatcagctatccag 316



 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 170 cagctcaactgggtttgatcttcgcacacaca 201
           ||||||||||||||||||||||||||||||||
Sbjct: 513 cagctcaactgggtttgatcttcgcacacaca 544