Miyakogusa Predicted Gene

Lj1g3v0001050.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0001050.2 Non Chatacterized Hit- tr|I1JB14|I1JB14_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16775
PE,78.07,0,PUTATIVE UNCHARACTERIZED PROTEIN (FRAGMENT),NULL;
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL; TPR,Te,CUFF.25139.2
         (3090 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57658 weakly similar to UniRef100_A7QPJ9 Cluster: Chr...   787   0.0  

>gnl|LJGI|TC57658 weakly similar to UniRef100_A7QPJ9 Cluster: Chromosome chr18
            scaffold_137, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr18 scaffold_137, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1056

 Score =  787 bits (397), Expect = 0.0
 Identities = 406/409 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2679 gctgtatcaatatagccacttccaacttctactttgtgcttctgagatcagtttacaacg 2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gctgtatcaatatagccacttccaacttctactttgtgcttctgagatcagtttacaacg 60

                                                                        
Query: 2739 tgggaatcacatgagctgtatcacccatgccaaaaaggcttctcaacttgtgcttcctga 2798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgggaatcacatgagctgtatcacccatgccaaaaaggcttctcaacttgtgcttcctga 120

                                                                        
Query: 2799 tgattatatattctttgcacatctactattgtgccgtgtttatgccatgaaaggtgatcg 2858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgattatatattctttgcacatctactattgtgccgtgtttatgccatgaaaggtgatcg 180

                                                                        
Query: 2859 tctaaattttcagaaagagtatataaggtgcttcgagctgaagacagattgtcatattgg 2918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tctaaattttcagaaagagtatataaggtgcttcgagctgaagacagattgtcatattgg 240

                                                                        
Query: 2919 ttggatctgtctcaaacttatggaatgtcaatatgaaatgctaatcaattcaaatttcat 2978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttggatctgtctcaaacttatggaatgtcaatatgaaatgctaatcaattcaaatttcat 300

                                                                        
Query: 2979 ggacttaagcattgaagaatgcattgaaaagggtgggaatagatggatggctgtgtataa 3038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ggacttaagcattgaagaatgcattgaaaagggtgggaatagatggatggctgtgtataa 360

                                                             
Query: 3039 ccttgtgaaaggtatggttttcttgcagaggaggtatttactctcagca 3087
            ||| |||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 361  cctggtgaaaggtatggtttccttgcagaggagggatttactctcagca 409