Miyakogusa Predicted Gene

Lj0g3v0364379.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0364379.1 tr|A9JSX6|A9JSX6_DANRE Zgc:174160 protein
OS=Danio rerio GN=zgc:174160 PE=2 SV=1,49.02,0.003,coiled-coil,NULL;
seg,NULL,CUFF.25098.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75902                                                      654   0.0  

>gnl|LJGI|TC75902 
          Length = 1041

 Score =  654 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgatgactggaaagtacaacatcacacatgatgaagctcgtgatagtgctgccaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtgatgactggaaagtacaacatcacacatgatgaagctcgtgatagtgctgccaaa 500

                                                                       
Query: 61  ctcatactcaaaatattgctgaatcagacaggaaagagggtgaaagactacaattatcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcatactcaaaatattgctgaatcagacaggaaagagggtgaaagactacaattatcat 560

                                                                       
Query: 121 gtgttggacgacattcacaatgagttgcaggtgaaagaagtacaaatcaaagacttgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttggacgacattcacaatgagttgcaggtgaaagaagtacaaatcaaagacttgaaa 620

                                                                       
Query: 181 cgggatttggaagagaaggacaaggaaattgcgggctttggtggtcagttaggaaagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgggatttggaagagaaggacaaggaaattgcgggctttggtggtcagttaggaaagaag 680

                                                                       
Query: 241 gaggaacagatcacaatcatggctgaagagatcgcacttcttgagcaggaggtgagaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggaacagatcacaatcatggctgaagagatcgcacttcttgagcaggaggtgagaaca 740

                                         
Query: 301 atgaagggggtcctgcgatacccaaagtag 330
           ||||||||||||||||||||||||||||||
Sbjct: 741 atgaagggggtcctgcgatacccaaagtag 770