Miyakogusa Predicted Gene

Lj0g3v0363779.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0363779.1 tr|I3STC4|I3STC4_LOTJA Proteasome subunit alpha
type OS=Lotus japonicus PE=2 SV=1,98.8,0,PROTEASOME_A_1,Proteasome,
alpha-subunit, N-terminal domain; no description,NULL;
Proteasome,Proteas,CUFF.25081.1
         (750 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57218 homologue to UniRef100_A5AXI5 Cluster: Proteaso...  1487   0.0  

>gnl|LJGI|TC57218 homologue to UniRef100_A5AXI5 Cluster: Proteasome subunit alpha
           type; n=1; Vitis vinifera|Rep: Proteasome subunit alpha
           type - Vitis vinifera (Grape), complete
          Length = 1132

 Score = 1487 bits (750), Expect = 0.0
 Identities = 750/750 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcagcattggaactggttacgatctatcggtcactactttctctccagatggacgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  atgagcagcattggaactggttacgatctatcggtcactactttctctccagatggacgc 140

                                                                       
Query: 61  gtcttccagattgagtacgccgctaaagccgtcgacaacagcgggactgtgattgggatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtcttccagattgagtacgccgctaaagccgtcgacaacagcgggactgtgattgggatc 200

                                                                       
Query: 121 aaatgcaaagatgggattgtgttgggtgtggagaagcttattccgtcgaaaatgatgcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgcaaagatgggattgtgttgggtgtggagaagcttattccgtcgaaaatgatgcta 260

                                                                       
Query: 181 ccgggttccaatagaagaatacactctgtccatcgccactctgggatggctgtagcagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgggttccaatagaagaatacactctgtccatcgccactctgggatggctgtagcagga 320

                                                                       
Query: 241 ttagcagcagatggcaggcaaattgttgctagggctaaggctgaagcaaataactatgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcagcagatggcaggcaaattgttgctagggctaaggctgaagcaaataactatgac 380

                                                                       
Query: 301 agcacgtacggtgaacctattcctgttaaggaacttgctgatcgtgtggctagttatgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcacgtacggtgaacctattcctgttaaggaacttgctgatcgtgtggctagttatgtg 440

                                                                       
Query: 361 cacctctgtacgttatattggtggctcagaccttttggatgtggtgtcatcctaggaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacctctgtacgttatattggtggctcagaccttttggatgtggtgtcatcctaggaggt 500

                                                                       
Query: 421 tatgacagagatggaccacagttgtacatggtcgaaccttccggtgtttcctataggtat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgacagagatggaccacagttgtacatggtcgaaccttccggtgtttcctataggtat 560

                                                                       
Query: 481 tttggtgctgcaattgggaagggcagacaggctgctaaaacagagattgaaaagttaaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttggtgctgcaattgggaagggcagacaggctgctaaaacagagattgaaaagttaaag 620

                                                                       
Query: 541 cttgctgatatgacttgccgacaaggagttattgaagtagctaagattatctatggagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgctgatatgacttgccgacaaggagttattgaagtagctaagattatctatggagtt 680

                                                                       
Query: 601 catgatgaggccaaggataaagacttcgaactagaaatgagctgggtgtgcgatgaatct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgatgaggccaaggataaagacttcgaactagaaatgagctgggtgtgcgatgaatct 740

                                                                       
Query: 661 aagcgtcaacatgaaaaggtcccagatgatcttctagaagctgccaaggcagcagccaaa 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagcgtcaacatgaaaaggtcccagatgatcttctagaagctgccaaggcagcagccaaa 800

                                         
Query: 721 gcagctcttgaagaaatggatgctgattaa 750
           ||||||||||||||||||||||||||||||
Sbjct: 801 gcagctcttgaagaaatggatgctgattaa 830