Miyakogusa Predicted Gene

Lj0g3v0363599.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0363599.3 Non Chatacterized Hit- tr|I1LXD4|I1LXD4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4378
PE=,72.73,0,seg,NULL; CCCH zinc finger,NULL; zinc finger,Zinc finger,
CCCH-type; ZF_C3H1,Zinc finger, CCCH-type;,CUFF.25062.3
         (1242 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66407                                                      184   9e-46
gnl|LJGI|BP081364 UniRef100_Q7Z2Z1 Cluster: Uncharacterized prot...    74   2e-12
gnl|LJGI|FS338935 similar to UniRef100_A7NVJ3 Cluster: Chromosom...    70   4e-11

>gnl|LJGI|TC66407 
          Length = 677

 Score =  184 bits (93), Expect = 9e-46
 Identities = 119/125 (95%), Gaps = 2/125 (1%)
 Strand = Plus / Plus

                                                                       
Query: 831 ctatgtctgtcctacctttgaagcaacaggaacctgtgttcaaggaaccaaatgcaagct 890
           |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 458 ctatgtttgtcctacttttgaagcaacagga-cctgtgttcaaggaaccaaatgcaagct 516

                                                                       
Query: 891 tcaccaccccaaaaaacaaagcaagggaaagaaaagaaagagatctgaagatcagaacag 950
           ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| 
Sbjct: 517 tcaccaccc-aaaaaacaaagcaagggaaagaaaagaaagagatctcaagatcagaacaa 575

                
Query: 951 tagag 955
           |||||
Sbjct: 576 tagag 580



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 712 ttatgcacaaacagaaattgcccatatagac 742
           |||||| ||||||||||||||||||||||||
Sbjct: 52  ttatgctcaaacagaaattgcccatatagac 82


>gnl|LJGI|BP081364 UniRef100_Q7Z2Z1 Cluster: Uncharacterized protein C15orf42; n=2; Homo
            sapiens|Rep: Uncharacterized protein C15orf42, partial
            (0%)
          Length = 358

 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 102/124 (82%), Gaps = 6/124 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1099 gatcaatcatttgagcactcagaattttgtgataatgattccatggatttacagttggat 1158
            ||||||||||||||||| |||  ||||||||  ||||| |||||||||||      ||||
Sbjct: 356  gatcaatcatttgagcaatcaacattttgtggcaatgactccatggattt------ggat 303

                                                                        
Query: 1159 actactgatgaacttaaaccagttctcataataacaaaattggcatcccaagcatctcag 1218
            |||  |||||||||||||||||||||   ||| || |||||| |||| |||||| |||||
Sbjct: 302  acttatgatgaacttaaaccagttcttgcaatgaccaaattgacatcgcaagcacctcag 243

                
Query: 1219 tcca 1222
            ||||
Sbjct: 242  tcca 239


>gnl|LJGI|FS338935 similar to UniRef100_A7NVJ3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 788

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 535 ttcacaagatttggaaaatgtaacaaggatggagggaagtgtccttatattcatg 589
           |||||||||||||| |||||||||| |||| | ||||||||||||||||||||||
Sbjct: 735 ttcacaagatttggtaaatgtaacagggat-gtgggaagtgtccttatattcatg 788