Miyakogusa Predicted Gene
- Lj0g3v0363199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0363199.1 Non Chatacterized Hit- tr|B9SU07|B9SU07_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.99,0.000000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; mTERF,Mitochodrial transcription termination
factor,CUFF.25022.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 1082 0.0
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 676 0.0
gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Ch... 278 7e-74
gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chr... 234 1e-60
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 153 3e-36
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 121 1e-26
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 1082 bits (546), Expect = 0.0
Identities = 885/998 (88%)
Strand = Plus / Plus
Query: 143 cttctgataaacaatctttcaccattacctacttcactgacaactgtggattctcacacc 202
|||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 199 cttctgataaacaatccttcactgtttcctacttcactaacaactgtggattctcacacc 258
Query: 203 aagcagctctcaaagcatccaaccgagttcgtttcgacgagccaaagaaacccgattcgg 262
|||| ||||||||||||||||||||||||| |||||| || |||| || ||||| ||||
Sbjct: 259 aagctgctctcaaagcatccaaccgagttcttttcgatgacgcaaacaagcccgactcgg 318
Query: 263 tcatcgccttcttcacaaaccacggtttctccatctcccagatacacaacatcattggca 322
| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 319 ttatcgccttcttcacaaaccacggtttctccatctcccagacacagaacatcatcggca 378
Query: 323 ggttaccagagctgcttgtattcgaccccaccaaaacgcttttgcccaagtttcaattct 382
| |||||||||| ||| || | |||||||||||| | ||||||| |||||||||||||
Sbjct: 379 aggtaccagagcttcttacatgcaaccccaccaaaagggttttgcctaagtttcaattct 438
Query: 383 tagcctccaaaggttctgacatagttaccactgtgactaggtacccgtatttcctgcgcc 442
|||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||
Sbjct: 439 tagcctccaaaggttctgacgtagtcaccactgtgactaggagcccgtatttcctgtgca 498
Query: 443 aaagccttgagcattacataatacctgcatttgaatttgtaaggacattctctccatctg 502
|||| |||||| || |||| ||||||| |||||||||||||||||| |||| | |||||
Sbjct: 499 aaagtcttgagaatcacattatacctgtatttgaatttgtaaggacgttctgccaatctg 558
Query: 503 atgaaaaagcaatcgcttgtgtactatttggttccaataccattactattgatcacatga 562
|||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 559 atgaaagagcaatcgcttgtgtactatttggttccaataccattgttattgatcgcatga 618
Query: 563 aatcaaaagtaaatttgctgcttgatatgggactgtctccctcaaacatataccttttat 622
||||||||||||| ||| ||||| |||||||| || ||||||||||||| ||| ||
Sbjct: 619 aatcaaaagtaaaattgttgcttaatatgggagtgactccctcaaacatccaccagttgc 678
Query: 623 ttagaatttcgcccactatactcagatttgctgacttgaaggaggctgtggaggaagtca 682
||| | || |||| || | |||| || ||||||||||| ||||||||||| ||||||||
Sbjct: 679 ttactacttggccctctgtgctcaaatgtgctgacttgacggaggctgtggtggaagtca 738
Query: 683 agggattgggatttcatccctctaaatctctttttgttgtagcattacaggccaaaaggg 742
|||||||||||||||||||||| ||||| | ||||||| |||||||| || ||||||||
Sbjct: 739 agggattgggatttcatccctccaaatcgcattttgtttcagcattacgggtcaaaaggg 798
Query: 743 ctgtatccaaatcgctttgggatgccaaactcgatgcctttaagacatggggctggtctg 802
| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 799 gtatatccaaatcgccttgggatgccaaactcgatgcctttaagacatggggctgccctg 858
Query: 803 aagatgatgttctggatgcatttaggagggatccccacattatgacatactcaatcaaaa 862
|||||| | |||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 859 aagatgctattctggatgcatttaggaggtatccccacatgatgctatactcaatcaaaa 918
Query: 863 aagtaaatgcagtgatgagtttttgggtcgaccatcttggttgggacccttcagtgcttc 922
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 919 aagttaatgcagtgatgagtttttgggtcgtccatcttggttgggacccttcagtgcttc 978
Query: 923 tagccgtgccatcactttttggatatagtttggagaaaaggcttaggccaagggcctcag 982
||||||||||| |||||||| || ||||||||||||||||||| |||||||| ||||
Sbjct: 979 tagccgtgccaacacttttttcattaagtttggagaaaaggcttatcccaagggcttcag 1038
Query: 983 ttgtccagtatcttctctccagaggtttgaggaagaaagatgctagcttaattaaaccat 1042
||||||||||||||||||||||||| |||| |||||| ||||||||||||| || |||||
Sbjct: 1039 ttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagtacaccat 1098
Query: 1043 ttatgttgactgagaagttgttcctgcaaaaatttgtggaatgttttgaggaggaggaaa 1102
|||| | ||||| ||| |||||| ||||||||||||| | ||||||||||||||||||
Sbjct: 1099 ttatatgtactgacaagctgttccagcaaaaatttgtgaattgttttgaggaggaggaag 1158
Query: 1103 catctaagctacttagtctatatcagggaggacgctag 1140
||||||||||||| |||||||||| ||||||| |||||
Sbjct: 1159 catctaagctactaagtctatatcggggaggaagctag 1196
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 676 bits (341), Expect = 0.0
Identities = 488/537 (90%)
Strand = Plus / Plus
Query: 544 attactattgatcacatgaaatcaaaagtaaatttgctgcttgatatgggactgtctccc 603
|||||||||||||||||||||||||||||||| ||| ||||| |||||||| || |||||
Sbjct: 1 attactattgatcacatgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccc 60
Query: 604 tcaaacatataccttttatttagaatttcgcccactatactcagatttgctgacttgaag 663
||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||
Sbjct: 61 tcaaacatataccttttgcttagaactaggcccactatactcagatgtgctgacttgaac 120
Query: 664 gaggctgtggaggaagtcaagggattgggatttcatccctctaaatctctttttgttgta 723
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 121 gaggctgtggaggaagtcaagggattgggatttcatccctccaaatcgcattttgttgta 180
Query: 724 gcattacaggccaaaagggctgtatccaaatcgctttgggatgccaaactcgatgccttt 783
|| |||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||
Sbjct: 181 gcgttacaggccaaaaggggtatatccaaatcactttgggatgccaaagtcgatgccttt 240
Query: 784 aagacatggggctggtctgaagatgatgttctggatgcatttaggagggatccccacatt 843
|||||||| |||||||||||||||| | || ||||||||||||||||| |||||||||||
Sbjct: 241 aagacatgtggctggtctgaagatgctattttggatgcatttaggaggaatccccacatt 300
Query: 844 atgacatactcaatcaaaaaagtaaatgcagtgatgagtttttgggtcgaccatcttggt 903
||| || ||||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct: 301 atgctatgctcaatcaaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggt 360
Query: 904 tgggacccttcagtgcttctagccgtgccatcactttttggatatagtttggagaaaagg 963
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 361 tgggacccttcagtgcttctagccgtgccatcacttttttcattaagtttggagaaaagg 420
Query: 964 cttaggccaagggcctcagttgtccagtatcttctctccagaggtttgaggaagaaagat 1023
|||| |||||||| ||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 421 cttatcccaagggcttcagttgtccagtatcttctctccagaggattgatgaagaaggat 480
Query: 1024 gctagcttaattaaaccatttatgttgactgagaagttgttcctgcaaaaatttgtg 1080
|||||||||| || ||||||||| | |||||||||| ||||||||||| ||||||
Sbjct: 481 gctagcttaagtacaccatttatatgtactgagaagtatttcctgcaaaagtttgtg 537
>gnl|LJGI|BW631473 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 475
Score = 278 bits (140), Expect = 7e-74
Identities = 278/324 (85%)
Strand = Plus / Plus
Query: 130 accacttctcattcttctgataaacaatctttcaccattacctacttcactgacaactgt 189
||||||||||||||||||||||||||||| |||||| || |||||||||| ||| |||
Sbjct: 140 accacttctcattcttctgataaacaatcattcaccctttcctacttcacaaacacttgt 199
Query: 190 ggattctcacaccaagcagctctcaaagcatccaaccgagttcgtttcgacgagccaaag 249
|| |||||| |||||| |||||||||||| |||| ||||||||||||||| || ||
Sbjct: 200 ggcttctcatcccaagctgctctcaaagcagccaagcgagttcgtttcgacaccgcagag 259
Query: 250 aaacccgattcggtcatcgccttcttcacaaaccacggtttctccatctcccagatacac 309
|| || ||||| || || ||||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 260 aagcctgattcagttattgccttcttcacaaaccagggtttctccatctctcagacacac 319
Query: 310 aacatcattggcaggttaccagagctgcttgtattcgaccccaccaaaacgcttttgccc 369
| ||||||| ||||| |||||||| | ||| ||||||||||||||| || | ||||||||
Sbjct: 320 agcatcattcgcagggtaccagaggtacttttattcgaccccaccataagggttttgccc 379
Query: 370 aagtttcaattcttagcctccaaaggttctgacatagttaccactgtgactaggtacccg 429
||||||||||| |||||||||| |||| ||||||||| ||||||||| ||||| ||||
Sbjct: 380 aagtttcaatttctagcctccaagggttttgacatagtgaccactgtgtctaggaccccg 439
Query: 430 tatttcctgcgccaaagccttgag 453
|||||||||| |||||||||||
Sbjct: 440 tatttcctgcttaaaagccttgag 463
>gnl|LJGI|TC80892 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 488
Score = 234 bits (118), Expect = 1e-60
Identities = 217/250 (86%)
Strand = Plus / Plus
Query: 147 tgataaacaatctttcaccattacctacttcactgacaactgtggattctcacaccaagc 206
|||||||||||| ||||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 125 tgataaacaatccttcactgtttcctacttcaaaaccaactgtggattctcacaccaagc 184
Query: 207 agctctcaaagcatccaaccgagttcgtttcgacgagccaaagaaacccgattcggtcat 266
|||||||||||||||||| ||||||| ||| |||| |||| ||||||||||| |||||
Sbjct: 185 agctctcaaagcatccaagcgagttctcttcaacgacgcaaacaaacccgattcagtcat 244
Query: 267 cgccttcttcacaaaccacggtttctccatctcccagatacacaacatcattggcaggtt 326
| ||||||||||||||||||||||| || ||||||| | ||||||| ||||||||||
Sbjct: 245 caccttcttcacaaaccacggtttcaccctctcccaaacacacaacgtcattggcagaac 304
Query: 327 accagagctgcttgtattcgaccccaccaaaacgcttttgcccaagtttcaattcttagc 386
||||||||| ||| | ||||||||||||| || |||| |||||||||||||||| ||||
Sbjct: 305 accagagcttcttctcttcgaccccaccacaaagcttctgcccaagtttcaatttctagc 364
Query: 387 ctccaaaggt 396
||||||||||
Sbjct: 365 ctccaaaggt 374
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 153 bits (77), Expect = 3e-36
Identities = 218/265 (82%)
Strand = Plus / Minus
Query: 868 aatgcagtgatgagtttttgggtcgaccatcttggttgggacccttcagtgcttctagcc 927
||||||||||||| ||| ||||| || || ||||||||||| |||| | |||||||||
Sbjct: 470 aatgcagtgatgaatttgtgggttgatcagcttggttgggatacttcggcgcttctagct 411
Query: 928 gtgccatcactttttggatatagtttggagaaaaggcttaggccaagggcctcagttgtc 987
| || | | ||||||||||| |||||||| ||| ||| |||||||| |||||||||
Sbjct: 410 gcaccgataatatttggatatagcttggagaagaggattattccaagggcttcagttgtc 351
Query: 988 cagtatcttctctccagaggtttgaggaagaaagatgctagcttaattaaaccatttatg 1047
||||||||||||| | |||||||| |||||| || |||||||||| || |||||||
Sbjct: 350 aagtatcttctctctaaaggtttgatgaagaaggaagctagcttaactacaccatttggt 291
Query: 1048 ttgactgagaagttgttcctgcaaaaatttgtggaatgttttgaggaggaggaaacatct 1107
|||||||| || ||||||||||||| || ||| | ||||||||| ||||||||||||||
Sbjct: 290 ttgactgatgagctgttcctgcaaaagttcgtgaactgttttgagaaggaggaaacatct 231
Query: 1108 aagctacttagtctatatcagggag 1132
| ||| || || || ||||||||||
Sbjct: 230 aggctgctaaggctgtatcagggag 206
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 121 bits (61), Expect = 1e-26
Identities = 164/197 (83%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 938 tttttggatatagtttggagaaaaggcttaggccaagggcctcagttgtccagtatcttc 997
||||||||| ||||||||||| |||| || |||||||| |||||||| ||||||||||
Sbjct: 94 tttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagtatcttc 153
Query: 998 tctccagaggtttgaggaagaaagatgctagcttaattaaaccatttatgttgactgaga 1057
|||| | |||||||| |||||||| |||||| ||| ||| ||| ||| |||||||| |
Sbjct: 154 tctctaaaggtttgatgaagaaaggtgctagtttagttacacctttttgtttgactgata 213
Query: 1058 agttgttcctgcaaaaatttgtggaatgttttgaggaggaggaaacat-ctaagctactt 1116
||||||||||||| || ||||| |||||||||| ||| |||||||| ||| |||| |
Sbjct: 214 agttgttcctgcagaagtttgttacatgttttgagaagggggaaacatactaggctattg 273
Query: 1117 agtctatatcagggagg 1133
| ||||||||||||||
Sbjct: 274 aagctatatcagggagg 290