Miyakogusa Predicted Gene

Lj0g3v0363169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0363169.1 tr|G7ZX28|G7ZX28_MEDTR
Beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltran,93.28,0,GLYCOSYLATION ENZYME-LIKE
PROTEIN,NULL; GLYCOSYLTRANSFERASE 14 FAMILY MEMBER,NULL; seg,NULL;
Branch,,CUFF.25016.1
         (357 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79810 weakly similar to UniRef100_A7Q2N5 Cluster: Chr...   129   1e-29
gnl|LJGI|TC61542 similar to UniRef100_A7PML1 Cluster: Chromosome...    52   2e-06

>gnl|LJGI|TC79810 weakly similar to UniRef100_A7Q2N5 Cluster: Chromosome chr1
           scaffold_46, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (58%)
          Length = 1176

 Score =  129 bits (65), Expect = 1e-29
 Identities = 111/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 226 gagagttcagagtgggactggtttataaacctcagtgcctcagattatcctctcgtgaca 285
           ||||| ||| ||||| |||||||||| || ||||||||||||||||||||||| ||||| 
Sbjct: 4   gagagctcacagtggaactggtttattaatctcagtgcctcagattatcctct-gtgact 62

                                                                       
Query: 286 caggttgatttgcttcatgttttctcgaatttatctagagatctcaatttcattgaacat 345
           |||| ||||||||||||| ||||||| ||| | || ||||| ||||||||||||||||||
Sbjct: 63  caggatgatttgcttcatattttctctaatctgtcaagagacctcaatttcattgaacat 122

                
Query: 346 acacg 350
           |||||
Sbjct: 123 acacg 127


>gnl|LJGI|TC61542 similar to UniRef100_A7PML1 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (96%)
          Length = 2064

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 238 tgggactggtttataaacctcagtgcctcagattatcc 275
           |||||||||||||| || ||||||||||| ||||||||
Sbjct: 725 tgggactggtttatcaatctcagtgcctctgattatcc 762