Miyakogusa Predicted Gene
- Lj0g3v0362709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0362709.1 Non Chatacterized Hit- tr|I3S5I7|I3S5I7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,TRP_SYNTHASE_BETA,Tryptophan synthase, beta chain,
conserved site; Tryptophan synthase beta
subunit-,NODE_60639_length_1598_cov_14.050689.path1.1
(1257 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57200 homologue to UniRef100_O50046 Cluster: Tryptoph... 1217 0.0
gnl|LJGI|TC77270 similar to UniRef100_Q5KT13 Cluster: Tryptophan... 1138 0.0
gnl|LJGI|TC67961 homologue to UniRef100_A7P0U9 Cluster: Chromoso... 363 2e-99
gnl|LJGI|TC59521 homologue to UniRef100_Q5KT13 Cluster: Tryptoph... 248 7e-65
gnl|LJGI|GO021339 weakly similar to UniRef100_A7QUM1 Cluster: Ch... 60 4e-08
>gnl|LJGI|TC57200 homologue to UniRef100_O50046 Cluster: Tryptophan synthase beta chain
2, chloroplast precursor; n=1; Camptotheca acuminata|Rep:
Tryptophan synthase beta chain 2, chloroplast precursor -
Camptotheca acuminata, partial (43%)
Length = 911
Score = 1217 bits (614), Expect = 0.0
Identities = 621/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 636 tttgggttcggttgcgggaccacatccgtatcctatgatggtaagagagtttcaagccgt 695
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 tttgggttcggttgcgggaccacatccgtatcctatgatg-taagagagtttcaagccgt 60
Query: 696 gattggcaaagaaacaagaaagcaagcattggagaaatggggagggaagccagatattct 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattggcaaagaaacaagaaagcaagcattggagaaatggggagggaagccagatattct 120
Query: 756 ggtagcatgtgttggtggtggttcgaatgcgatgggacttttccatgaatttatcgatga 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtagcatgtgttggtggtggttcgaatgcgatgggacttttccatgaatttatcgatga 180
Query: 816 caaagatgttaggctgattggagtggaggctgctgggttgggcctagaaagcggtaagca 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaagatgttaggctgattggagtggaggctgctgggttgggcctagaaagcggtaagca 240
Query: 876 tgccgctacattaacaaaaggagagatcggagttttgcatggagcaatgagctatctttt 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgccgctacattaacaaaaggagagatcggagttttgcatggagcaatgagctatctttt 300
Query: 936 gcaagatgatgatgggcaaataattgagcctcactctattagtgcagggttggactaccc 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaagatgatgatgggcaaataattgagcctcactctattagtgcagggttggactaccc 360
Query: 996 tggggttggaccagagcatagcttcttgaaagatgtagggcgggctgaatactacagtgt 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggggttggaccagagcatagcttcttgaaagatgtagggcgggctgaatactacagtgt 420
Query: 1056 tactgatgaagaagcactagaagcttttaaaagactgtcccagctggaaggcataattcc 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactgatgaagaagcactagaagcttttaaaagactgtcccagctggaaggcataattcc 480
Query: 1116 agctttggagacatctcatgctttggcttatttagagaagctctgtcctacccttccgaa 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctttggagacatctcatgctttggcttatttagagaagctctgtcctacccttccgaa 540
Query: 1176 tggaactaaggttgtggttaactgcagtggcagaggggataaggatgttcaaactgcttc 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggaactaaggttgtggttaactgcagtggcagaggggataaggatgttcaaactgcttc 600
Query: 1236 caagtacttcaatgtttgaaat 1257
||||||||||||||||||||||
Sbjct: 601 caagtacttcaatgtttgaaat 622
>gnl|LJGI|TC77270 similar to UniRef100_Q5KT13 Cluster: Tryptophan synthase beta
subunit; n=1; Persicaria tinctoria|Rep: Tryptophan
synthase beta subunit - Persicaria tinctoria, partial
(40%)
Length = 743
Score = 1138 bits (574), Expect = 0.0
Identities = 619/626 (98%), Gaps = 6/626 (0%)
Strand = Plus / Plus
Query: 1 atggaggaccgcaccaaacaagacagtgaagaaaccaatggcagttctgtcctatctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggaggaccgcaccaaacaagacagtgaagaaaccaatggcagttctgtcctatctcac 180
Query: 61 cgacccgattcatttggccggtatggtcggtttggtggcaagtatgtccctgaaactctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgacccgattcatttggccggtatggtcggtttggtggcaagtatgtccctgaaactctc 240
Query: 121 atgcatgcaatcactgagctagaggcagcgttccattcccttgctcatgatgaagccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgcatgcaatcactgagctagaggcagcgttccattcccttgctcatgatgaagccttc 300
Query: 181 cagaaagagcttggtgggatactgagggactatgtgggtagggagagcccactttac-tt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 cagaaagagcttggtgggatactgagggactatgtgggtagggagagcccactttacttt 360
Query: 240 tgctgagagactgactgagcactacaggcgtggtgatggggaagggcctcatgtgtatct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgagagactgactgagcactacaggcgtggtgatggggaagggcctcatgtgtatct 420
Query: 300 gaagagggagga-tctcaaccacactggtgctcataagattaataatgctgttgctcagg 358
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagagggaggattctcaaccacactggtgctcataagattaataatgctgttgctcagg 480
Query: 359 ctttgcttgccaagaggttggggaagaagagggttattgctgagactggtgctgggcagc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctttgcttgccaagaggttggggaagaagagggttattgctgagactggtgctgggcagc 540
Query: 419 atggagttgctactgccactgtgtgtgctcggttcgggttggaatgtgttgtttatatgg 478
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggagtcgctactgccactgtgtgtgctcggttcgggttggaatgtgttgtttatatgg 600
Query: 479 gtgctcaggatatggaaaggcagtcccttaatgttttcagaatgcgtctacttggtgctg 538
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgctca-gatatggaaaggcagtcccttaatgttttcagaatgcgtctacttggtgctg 659
Query: 539 aggtgagagcagtacattctgggactgctacgctgaaggatgctacgtcagaagctataa 598
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 660 a-gtgagagcagtacattctgggactgctacgctgaa-gatgctacgtcagaagctataa 717
Query: 599 gggattgggtgactaatgtggagaca 624
|||| |||||||||||||||||||||
Sbjct: 718 ggga-tgggtgactaatgtggagaca 742
>gnl|LJGI|TC67961 homologue to UniRef100_A7P0U9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 695
Score = 363 bits (183), Expect = 2e-99
Identities = 393/463 (84%)
Strand = Plus / Plus
Query: 795 tttccatgaatttatcgatgacaaagatgttaggctgattggagtggaggctgctgggtt 854
||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 1 tttccatgaatttgttgatgacaaagatgttaggctaattggtgtggaggctgctggatt 60
Query: 855 gggcctagaaagcggtaagcatgccgctacattaacaaaaggagagatcggagttttgca 914
||||| || || || |||||||| || |||||||| || ||||| | || ||||||||
Sbjct: 61 tggcctggacagtggcaagcatgctgcgacattaacgaagggagaagttggggttttgca 120
Query: 915 tggagcaatgagctatcttttgcaagatgatgatgggcaaataattgagcctcactctat 974
|||||| ||||||||| | | || ||||||||||| |||||| | ||||||||||||||
Sbjct: 121 tggagctatgagctatttgcttcaggatgatgatggccaaatagtcgagcctcactctat 180
Query: 975 tagtgcagggttggactaccctggggttggaccagagcatagcttcttgaaagatgtagg 1034
|||||||| |||||||||||||| |||||||| || |||||||| ||||| ||| ||||
Sbjct: 181 cagtgcaggcttggactaccctggcgttggacctgaacatagctttttgaaggatttagg 240
Query: 1035 gcgggctgaatactacagtgttactgatgaagaagcactagaagcttttaaaagactgtc 1094
||| |||||||| || || | ||||||||||||||| | |||||||| || ||| | ||
Sbjct: 241 gcgtgctgaatattatagcatcactgatgaagaagcattggaagctttcaagagagtttc 300
Query: 1095 ccagctggaaggcataattccagctttggagacatctcatgctttggcttatttagagaa 1154
| || |||||||||||||||||| |||||||||||||||| ||||| || |||||||
Sbjct: 301 acgacttgaaggcataattccagctctggagacatctcatgcgttggcatacctagagaa 360
Query: 1155 gctctgtcctacccttccgaatggaactaaggttgtggttaactgcagtggcagagggga 1214
| ||||| |||||||| |||||||| ||||||||| |||||| ||||||| |||| ||
Sbjct: 361 agtgtgtccaacccttcctaatggaaccaaggttgtgcttaacttcagtggccgaggtga 420
Query: 1215 taaggatgttcaaactgcttccaagtacttcaatgtttgaaat 1257
||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 421 taaggatgttcaaactgctatcaagtacttgaaggtttgaaat 463
>gnl|LJGI|TC59521 homologue to UniRef100_Q5KT13 Cluster: Tryptophan synthase beta
subunit; n=1; Persicaria tinctoria|Rep: Tryptophan
synthase beta subunit - Persicaria tinctoria, partial
(34%)
Length = 743
Score = 248 bits (125), Expect = 7e-65
Identities = 389/477 (81%)
Strand = Plus / Plus
Query: 62 gacccgattcatttggccggtatggtcggtttggtggcaagtatgtccctgaaactctca 121
|||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||| |
Sbjct: 267 gacctgattcatttggcaggtttgggaagtttggtggcaagtatgtccctgaaactctaa 326
Query: 122 tgcatgcaatcactgagctagaggcagcgttccattcccttgctcatgatgaagccttcc 181
|||| || |||| ||||| ||||| ||||| |||||||| || |||||| | || |
Sbjct: 327 tgcacgctctcaccgagcttgaggcggcgtttcattccctcactgctgatgaggattttc 386
Query: 182 agaaagagcttggtgggatactgagggactatgtgggtagggagagcccactttactttg 241
||| |||||| | ||| || || | || ||||| ||| ||||||| || ||||| ||||
Sbjct: 387 agagagagctggctggaattctaaaagattatgttggtcgggagagtcctctttattttg 446
Query: 242 ctgagagactgactgagcactacaggcgtggtgatggggaagggcctcatgtgtatctga 301
| || || |||| |||||||||| | | | |||| ||||||||||| | |||||||
Sbjct: 447 cagaaaggttgacagagcactacaagaggcctaatggtgaagggcctcacatttatctga 506
Query: 302 agagggaggatctcaaccacactggtgctcataagattaataatgctgttgctcaggctt 361
||||||| ||||| || ||||| || ||||| || ||||| ||||||||||| |||||||
Sbjct: 507 agagggaagatcttaatcacaccggggctcacaaaattaacaatgctgttgcccaggctt 566
Query: 362 tgcttgccaagaggttggggaagaagagggttattgctgagactggtgctgggcagcatg 421
||||||||||||| || || ||||| | |||||||||| ||||| || || |||||||
Sbjct: 567 tgcttgccaagagtttaggcaagaaacgcattattgctgaaactggagccggtcagcatg 626
Query: 422 gagttgctactgccactgtgtgtgctcggttcgggttggaatgtgttgtttatatgggtg 481
||||||| ||||| ||||| |||||||| || || | ||||| || ||||||||||||
Sbjct: 627 gagttgccactgcaactgtatgtgctcgatttggtctagaatgcattatttatatgggtg 686
Query: 482 ctcaggatatggaaaggcagtcccttaatgttttcagaatgcgtctacttggtgctg 538
| |||||||||||||||||| | || ||||||||||| |||||||| ||||||||||
Sbjct: 687 cacaggatatggaaaggcaggcactcaatgttttcaggatgcgtcttcttggtgctg 743
>gnl|LJGI|GO021339 weakly similar to UniRef100_A7QUM1 Cluster: Chromosome chr10
scaffold_179, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_179, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 674
Score = 60.0 bits (30), Expect = 4e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 694 gtgattggcaaagaaacaagaaagcaagcattggagaaatggggagggaagccagatatt 753
|||||||| |||||||| || || ||||||| ||| |||||||||||||| |||||||||
Sbjct: 602 gtgattgggaaagaaacgaggaaacaagcat-ggaaaaatggggagggaaaccagatatt 660
Query: 754 ct 755
||
Sbjct: 661 ct 662