Miyakogusa Predicted Gene
- Lj0g3v0362529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0362529.1 Non Chatacterized Hit- tr|I1LKX6|I1LKX6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24082 PE,88.57,0,no
description,WD40/YVTN repeat-like-containing domain; no
description,Tetratricopeptide-like helica,CUFF.24974.1
(2391 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67130 similar to UniRef100_A7PQN0 Cluster: Chromosome... 321 1e-86
gnl|LJGI|GO025144 similar to UniRef100_A7PQN0 Cluster: Chromosom... 196 4e-49
gnl|LJGI|DC599876 homologue to UniRef100_A7PQN0 Cluster: Chromos... 129 9e-29
>gnl|LJGI|TC67130 similar to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 736
Score = 321 bits (162), Expect = 1e-86
Identities = 376/446 (84%), Gaps = 1/446 (0%)
Strand = Plus / Plus
Query: 122 ggctcaagtaccagagaatgggaggaagcgtaccttcgcttctagccagtgatggagcgt 181
||||||||||||||||||||||||| ||||| ||||| || ||||| |||| || |
Sbjct: 283 ggctcaagtaccagagaatgggaggcagcgtgccttcactcttagccgccgatgccgcct 342
Query: 182 cttgcatcgccgtcgccgaacggatgatcgctctcggtactcacgacggcgtcgttcaca 241
| || ||||||||||| || ||||||||||| ||||| ||||||| |||| ||||||||
Sbjct: 343 cgtgtatcgccgtcgcggagcggatgatcgcactcggaactcacgccggcaccgttcaca 402
Query: 242 tccttgatttcctcgggaatcaggtgaaagaattcgctgctcatgttgcggttgtgaatg 301
|||| ||||| || || |||||||||||||||||| |||| |||| | | ||||| || |
Sbjct: 403 tcctcgattttcttggaaatcaggtgaaagaattctctgcacatgcttctgttgtcaacg 462
Query: 302 acctcagctttgataaagatggtgaatatattggaagctgttcggatgatggatcggttg 361
|||| | |||||| | ||| ||||||||||||||||||||||| |||||||| || ||||
Sbjct: 463 acctgaactttgacatagaaggtgaatatattggaagctgttctgatgatggttcagttg 522
Query: 362 taataagcagcctcttttctgatgagaagatgaagtttgagtatcatcgccctatgaagg 421
| |||| |||||| || |||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 523 ttataaacagccttttcactgatgagaaaatgaaattcgagtaccatcgccctatgaagg 582
Query: 422 cgattgctctggacccggattatgctagaaacacggctaggagatttgttgctggtggtt 481
| ||||| ||||||| || ||||| || || | | ||||||| ||||||||||| ||||
Sbjct: 583 caattgcgttggaccccgaatatgcgaggaaaatgtctaggaggtttgttgctggaggtt 642
Query: 482 tagcagggaatttatatttaaatt-caaagaggtggttaggatatcgtgaccaggttttg 540
|||| || ||||||||||||||| |||||| ||||| || ||||||||||||||||||
Sbjct: 643 tagctggtcatttatatttaaattccaaagaaatggttgggctatcgtgaccaggttttg 702
Query: 541 cactctggagaaggtccaatacatgc 566
|||||||| |||||| ||||||||||
Sbjct: 703 cactctggtgaaggttcaatacatgc 728
>gnl|LJGI|GO025144 similar to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 557
Score = 196 bits (99), Expect = 4e-49
Identities = 231/275 (84%)
Strand = Plus / Plus
Query: 263 aggtgaaagaattcgctgctcatgttgcggttgtgaatgacctcagctttgataaagatg 322
|||||||||||||| |||| |||| | | ||||| || ||||| | |||||| | ||| |
Sbjct: 42 aggtgaaagaattctctgcacatgcttctgttgtcaacgacctgaactttgacatagaag 101
Query: 323 gtgaatatattggaagctgttcggatgatggatcggttgtaataagcagcctcttttctg 382
|||||||||||||||||||||| |||||||| || ||||| |||| |||||| || |||
Sbjct: 102 gtgaatatattggaagctgttctgatgatggttcagttgttataaacagccttttcactg 161
Query: 383 atgagaagatgaagtttgagtatcatcgccctatgaaggcgattgctctggacccggatt 442
||||||| ||||| || ||| | ||||||||||||||||| ||||| ||||||| || |
Sbjct: 162 atgagaaaatgaaattcgagcaccatcgccctatgaaggcaattgcgttggaccccgaat 221
Query: 443 atgctagaaacacggctaggagatttgttgctggtggtttagcagggaatttatatttaa 502
|||| || || | | ||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 222 atgcgaggaaaatgtctaggaggtttgttgctggtggtttagctggtcatttatatttaa 281
Query: 503 attcaaagaggtggttaggatatcgtgaccaggtt 537
|||| |||| ||||| || |||||||||||||||
Sbjct: 282 attccaagaaatggttgggctatcgtgaccaggtt 316
>gnl|LJGI|DC599876 homologue to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 577
Score = 129 bits (65), Expect = 9e-29
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 2183 aggctgtagagtttgtgaccatgcagcatgatgatgaactttgggaagaactgatcaagc 2242
|||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 187 aggctgtagagtttgttaccatgcagcatgatgatgaactctgggaagaactaatcaagc 246
Query: 2243 aatgccttcacaaacctgaaatggt 2267
||||||||||||| ||||| |||||
Sbjct: 247 aatgccttcacaagcctgagatggt 271
Score = 93.7 bits (47), Expect = 5e-18
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 2107 gtcttcatccttggaaggatgggaaactcaaaacaagccctagctgttattataaataaa 2166
||||||||| | ||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 1 gtcttcatcttaggaaggatggggaactcaaaacaagccctcgccattattataaataaa 60
Query: 2167 ttaggggacatagaggagg 2185
|| ||||| ||||||||||
Sbjct: 61 ttgggggatatagaggagg 79