Miyakogusa Predicted Gene
- Lj0g3v0362259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0362259.1 tr|G7KUA6|G7KUA6_MEDTR U11/U12 small nuclear
ribonucleoprotein 35 kDa protein OS=Medicago
truncatula,46.67,0.0000000001,RRM,RNA recognition motif domain;
seg,NULL; no description,Nucleotide-binding, alpha-beta plait;
RRM,CUFF.24962.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63577 similar to UniRef100_A7QM44 Cluster: Chromosome... 1245 0.0
gnl|LJGI|TC76827 692 0.0
>gnl|LJGI|TC63577 similar to UniRef100_A7QM44 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 674
Score = 1245 bits (628), Expect = 0.0
Identities = 628/628 (100%)
Strand = Plus / Plus
Query: 1 atgagtttgagggccaaaaacttgaactgtgttttctatgcggattcctaccaccccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgagtttgagggccaaaaacttgaactgtgttttctatgcggattcctaccaccccatt 106
Query: 61 caagctggcagcatcgacggcaccgatattgttcctcacgacaatgccatctatcgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 caagctggcagcatcgacggcaccgatattgttcctcacgacaatgccatctatcgtgct 166
Query: 121 caactctgttcctctattggcctctatgacccatttggtgatcctaaatccattggagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 caactctgttcctctattggcctctatgacccatttggtgatcctaaatccattggagac 226
Query: 181 ccttattgcactctcttcgtgggtcgcctctctcctctcactactgaagatactatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ccttattgcactctcttcgtgggtcgcctctctcctctcactactgaagatactatccgc 286
Query: 241 aaggttatgagcaagtatggtagggtgaagaacttgcggttggtcagggacattgtgacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaggttatgagcaagtatggtagggtgaagaacttgcggttggtcagggacattgtgacc 346
Query: 301 ggagcttcttgtggttatgctttcgttgaatttgagaaagacagggagatgcgacgggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggagcttcttgtggttatgctttcgttgaatttgagaaagacagggagatgcgacgggca 406
Query: 361 tatatggatgctcatcatttgattgttgacgattgtgaaatcatagttgattacaacaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tatatggatgctcatcatttgattgttgacgattgtgaaatcatagttgattacaacaga 466
Query: 421 cagcgattgatgcccggatggattcccagaaggttaggtggtggtcttagtggtaagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cagcgattgatgcccggatggattcccagaaggttaggtggtggtcttagtggtaagaag 526
Query: 481 gaatcaggacaacttcgttttgggggaagagaaaaaccgtttcgcgcacccttgaaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gaatcaggacaacttcgttttgggggaagagaaaaaccgtttcgcgcacccttgaaacca 586
Query: 541 attccatatgaggaattgaagaagcttggcatcccacctccacctgagggaagatacatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 attccatatgaggaattgaagaagcttggcatcccacctccacctgagggaagatacatg 646
Query: 601 tcacgctttcaggtcccatcccctccta 628
||||||||||||||||||||||||||||
Sbjct: 647 tcacgctttcaggtcccatcccctccta 674
>gnl|LJGI|TC76827
Length = 866
Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus
Query: 729 ttcaagtcgccgggaagaccactcacgtggaaggagctcttcagagaggagtgaccgtta 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaagtcgccgggaagaccactcacgtggaaggagctcttcagagaggagtgaccgtta 60
Query: 789 ccatgaccggagttcagctgagagagaacaccggcataggagctcttcggagaggagtga 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatgaccggagttcagctgagagagaacaccggcataggagctcttcggagaggagtga 120
Query: 849 ccgttaccatgaccggagttcaggtgagagagaacaccagtataggagttctactgatga 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgttaccatgaccggagttcaggtgagagagaacaccagtataggagttctactgatga 180
Query: 909 gaaacgttctcatagaagaaaggaaagagatgaaaactctcggaggaaacatggatacac 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaacgttctcatagaagaaaggaaagagatgaaaactctcggaggaaacatggatacac 240
Query: 969 tagttcttctgaatctgatgagaaacattcacgcaaaagaaaggaaagagatgatgatca 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagttcttctgaatctgatgagaaacattcacgcaaaagaaaggaaagagatgatgatca 300
Query: 1029 ctctcggaggcgagaaagatatagtcgctattctcctcatgaggattaa 1077
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctctcggaggcgagaaagatatagtcgctattctcctcatgaggattaa 349