Miyakogusa Predicted Gene

Lj0g3v0362239.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0362239.2 tr|B9HF67|B9HF67_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1082438 PE=4
SV=1,39.58,1e-16,seg,NULL; FAMILY NOT NAMED,NULL; coiled-coil,NULL;
DUF869,Protein of unknown function DUF869, plant,CUFF.24960.2
         (2406 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82663 similar to UniRef100_A7PKQ3 Cluster: Chromosome...    56   1e-06

>gnl|LJGI|TC82663 similar to UniRef100_A7PKQ3 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1166

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tgccaaagaagacttggttaagcagcatgccaaagttgctgaagaatccattgctggctg 458
           |||||||||||||||||| || |||||| | ||||| ||||||||| |  |  | |||||
Sbjct: 365 tgccaaagaagacttggtaaatcagcattctaaagtcgctgaagaagctgtctcaggctg 424

                                   
Query: 459 ggaaaaggcggaaaacgaagtggt 482
           ||| ||||| ||||| ||||||||
Sbjct: 425 ggagaaggctgaaaatgaagtggt 448