Miyakogusa Predicted Gene

Lj0g3v0362149.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0362149.1 tr|G7L0Q1|G7L0Q1_MEDTR Protein GPR107 OS=Medicago
truncatula GN=MTR_7g100360 PE=4
SV=1,88.37,4e-37,Lung_7-TM_R,Transmembrane receptor, eukaryota; LUNG
SEVEN TRANSMEMBRANE RECEPTOR,NULL; LUNG SEVEN TR,CUFF.24950.1
         (291 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66486 homologue to UniRef100_A7PSV8 Cluster: Chromoso...   159   1e-38
gnl|LJGI|TC65096 similar to UniRef100_A7PSV8 Cluster: Chromosome...    92   2e-18

>gnl|LJGI|TC66486 homologue to UniRef100_A7PSV8 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 826

 Score =  159 bits (80), Expect = 1e-38
 Identities = 89/92 (96%)
 Strand = Plus / Plus

                                                                       
Query: 166 gggtggtcttttctcaagccattcttgcaggacagggagaagaaggtgttgataatcgtg 225
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9   gggtggtctttcctcaagccattcttgcaggacagggagaagaaggtgttgatgatcgtg 68

                                           
Query: 226 atcccgcttcaggttctggccaatttagcttc 257
           ||||||||||||||||| ||||||||||||||
Sbjct: 69  atcccgcttcaggttcttgccaatttagcttc 100


>gnl|LJGI|TC65096 similar to UniRef100_A7PSV8 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 1830

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 148/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 31  aatctgatctgtgccgcggaggataagcactacatcaaagtcaccggtctccctcacggc 90
           ||||| ||||| ||||||||||| ||||||||  | |||||||||||   ||||||||||
Sbjct: 775 aatctcatctgcgccgcggaggacaagcactatgtgaaagtcaccggcacccctcacggc 834

                                                                       
Query: 91  tgggatgtgctgttctacatcttccagttcatgcgtgtcattttgctcttcaatgtcatc 150
           ||||| || || ||||||||||||||| |||| || ||| |  | |||||||  ||||| 
Sbjct: 835 tgggacgtcctcttctacatcttccagctcatccgcgtcgtgcttctcttcaccgtcatt 894

                                                                       
Query: 151 gttttgatcggtacagggtggtcttttctcaagccattcttgcaggacagggagaagaag 210
           ||  | ||||| || || ||||| || |||||||||||| | ||||| | ||||||||||
Sbjct: 895 gtcctcatcggcaccggctggtccttcctcaagccattccttcaggagaaggagaagaag 954

             
Query: 211 gt 212
           ||
Sbjct: 955 gt 956