Miyakogusa Predicted Gene

Lj0g3v0362089.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0362089.1 Non Chatacterized Hit- tr|K4CHM5|K4CHM5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,61.25,4e-18,PALP,Tryptophan synthase beta subunit-like
PLP-dependent enzymes superfamily; CYSTEINE SYNTHASE,NULL,CUFF.24944.1
         (237 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68677 similar to UniRef100_A5B2H2 Cluster: Cysteine s...   244   2e-64

>gnl|LJGI|TC68677 similar to UniRef100_A5B2H2 Cluster: Cysteine synthase; n=1; Vitis
           vinifera|Rep: Cysteine synthase - Vitis vinifera
           (Grape), partial (47%)
          Length = 805

 Score =  244 bits (123), Expect = 2e-64
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                       
Query: 115 ggaatcgttgaagccattggtaactcccctttgattcgaatcaacagcctctccgatgcc 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggaatcgttgaagccattggtaactcccctttgattcgaatcaacagcctctccgatgcc 191

                                                                       
Query: 175 actggttgccaaattcttggcaagtgcgagtttttgaaccctggaggtagtgtcaaagat 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 actggttgccaaattcttggcaagtgcgagtttttgaaccctggaggtagtgtcaaagat 251

              
Query: 235 cgt 237
           |||
Sbjct: 252 cgt 254



 Score =  153 bits (77), Expect = 6e-37
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atggtgtcagcagcgagaagcgcaggcgctgttggtgccatcttgatcgtgtcgttggtg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 atggtgtcagcagcgagaagcgcaggcgctgttggtgccatcttgatcgtgtcgttggtg 77

                           
Query: 61 gtggcctatttcatctc 77
          |||||||||||||||||
Sbjct: 78 gtggcctatttcatctc 94