Miyakogusa Predicted Gene
- Lj0g3v0361919.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0361919.2 Non Chatacterized Hit- tr|G7IKW0|G7IKW0_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,86,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Leucine-rich repeats, typical
(most populate,Leucin,CUFF.24928.2
(3192 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023286 homologue to UniRef100_A7Q4M9 Cluster: Chromos... 1312 0.0
gnl|LJGI|TC82259 similar to UniRef100_A7Q4M9 Cluster: Chromosome... 1061 0.0
gnl|LJGI|TC76278 similar to UniRef100_A7Q4M9 Cluster: Chromosome... 460 e-128
>gnl|LJGI|GO023286 homologue to UniRef100_A7Q4M9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 688
Score = 1312 bits (662), Expect = 0.0
Identities = 679/687 (98%)
Strand = Plus / Plus
Query: 2279 ggttgattggggagctacattttctggatgatacgatatcattgacgcccgaggagctct 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggttgattggggagctacattttctggatgatacgatatcattgacgcccgaggagctct 61
Query: 2339 caagggccccagctgaagttttgggcagaagtagtcatggtacttcttacaaagcaactc 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caagggccccagctgaagttttgggcagaagtagtcatggtacttcttacaaagcaactc 121
Query: 2399 tggacaatggtatattgttgagagtgaagtggttgagagaaggggtggctaaacagagga 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggacaatggtatattgttgagagtgaagtggttgagagaaggggtggctaaacagagga 181
Query: 2459 aagaatttgttaaagagatnnnnnnntttgcgaacatcaggcatccaaatgtcgtcggat 2518
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 182 aagaatttgttaaagagataaaaaaatttgcgaacatcaggcatccaaatgtcgtcggat 241
Query: 2519 tgagaggatactattggggtcctacacagcatgagaagcttattctttcagattacattt 2578
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 tgagaggatactattggggtcctacgcagcatgagaagcttattctttcagattacattt 301
Query: 2579 caccaggaagtcttgcaagttttctttatgatcgaccagggaggaaaggccccctaacct 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caccaggaagtcttgcaagttttctttatgatcgaccagggaggaaaggccccctaacct 361
Query: 2639 gggcccaaaggctcaaattagcagttgatgtagcacgtggcctgaactatctccatttcg 2698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gggcccaaaggctcaaattagcagttgatgtagcacgtggcctgaactatctccatttcg 421
Query: 2699 atcgtgctgttccccatgggaaccttaaagccaccaatgtgttgttagatacacccgata 2758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atcgtgctgttccccatgggaaccttaaagccaccaatgtgttgttagatacacccgata 481
Query: 2759 tgaatgcacgtgtctctgattactgccttcaccggctcatgactcaagctggtaccatgg 2818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgaatgcacgtgtctctgattactgccttcaccggctcatgactcaagctggtaccatgg 541
Query: 2819 agcagattcttgatgctggggtcttgggttaccgcgcaccagagctagctgcttccaaga 2878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agcagattcttgatgctggggtcttgggttaccgcgcaccagagctagctgcttccaaga 601
Query: 2879 agccaatgccctccttcaagtctgatgtgtatgcttttggggtgatacttttggaacttc 2938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agccaatgccctccttcaagtctgatgtgtatgcttttggggtgatacttttggaacttc 661
Query: 2939 taactggaagatgtgctggtgatgtgg 2965
|||||||||||||||||||||||||||
Sbjct: 662 taactggaagatgtgctggtgatgtgg 688
>gnl|LJGI|TC82259 similar to UniRef100_A7Q4M9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 973
Score = 1061 bits (535), Expect = 0.0
Identities = 658/686 (95%), Gaps = 14/686 (2%)
Strand = Plus / Plus
Query: 1 atgaagctctttaggcttttagtgttatctttatctttcttatcagttgtggggcagctt 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 288 atgaagctctttaggcttttagtgttatctttatctttcttatcaggggtggggcagctt 347
Query: 61 ccttcccaggacattctaacattgctggaatttaagaaatgtatcaagcatgaccctact 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccttcccaggacattctaacatggctggaatttaagaaatgtatcaagcatgaccctact 407
Query: 121 ggttatgtcctcaattcctggaatgaggaatccattgactttgatggatgcccctcttca 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 408 ggttatgtcctcaattcctggaatgaggaatccattgactttgatggctgcccctcttca 467
Query: 181 tggaatggagttttgtgtaatggtggtaatgttgctggggttgtccttgataacatgggt 240
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 468 tggaatggagtttcgtgtaatggtggtaatgtggctggggttgtccttgataacatgggt 527
Query: 241 ctctcagctgatgctgacttaagtgttttttcaaacctcacaaagcttgtgaaactctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ctctcagctgatgctgacttaagtgttttttcaaacctcacaaagcttgtgaaactctcc 587
Query: 301 atgtcgaacaatttcatgtcaggaaaactacctgacaatgctgctgatttcaaaagcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atgtcgaacaatttcatgtcaggaaaactacctgacaatgctgctgatttcaaaagcctt 647
Query: 361 gaattcctggatatctccaataacctcttttcctcacctttaccaccggaaattggtaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gaattcctggatatctccaataacctcttttcctcacctttaccaccggaaattggtaac 707
Query: 421 tttggtagcttgcagaatctgtcattagccgggaacaacttctctggccgaattcctaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tttggtagcttgcagaatctgtcattagccgggaacaacttctctggccgaattcctaac 767
Query: 481 tccatttcagacatggcttctatcaaatctctcgacttgagccgcaactccttgtct-gg 539
|||||||||||||||||||||||||||||||||||||||||||| || ||||||| | ||
Sbjct: 768 tccatttcagacatggcttctatcaaatctctcgacttgagccggaaatccttgtttggg 827
Query: 540 agccctgcca--gcatca-ttgact-aagctgaa--taatcttgt-atctctt-aacttg 591
||||||| || |||| |||||| |||||||| |||||||| ||||||| ||||||
Sbjct: 828 agccctggcaagnnatcatttgactaaagctgaaataaatcttgtgatctcttaaacttg 887
Query: 592 t-ctc--ataatggc-ttcactgga-aaaattcccaaaggttttgacaagatctctaccc 646
| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 888 tgctcatataatggcgttcactggagaaaattcccaaaggttttgacaagatctctaacc 947
Query: 647 ttgaaaagcttgacttgcatgggaat 672
||||||||||||||||||||||||||
Sbjct: 948 ttgaaaagcttgacttgcatgggaat 973
>gnl|LJGI|TC76278 similar to UniRef100_A7Q4M9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 483
Score = 460 bits (232), Expect = e-128
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 2949 atgtgctggtgatgtggtatccggtgaagacggaggtgtggatcttacagattggataag 3008
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 480 atgtgctggtgatgtggtatccggtgaagacggaggtgtggattttacagattggataag 421
Query: 3009 gttgcgcgtatctgaaggtcgaggctcagaatgttttgatgctatcttgatgccagaaat 3068
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gttgcgcgtatttgaaggtcgaggctcagaatgttttgatgctatcttgatgccagaaat 361
Query: 3069 gagcaattcagttgtagaaaaggggatgaaggaggtcctaggaatagcgattcgatgcat 3128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagcaattcagttgtagaaaaggggatgaaggaggtcctaggaatagcgattcgatgcat 301
Query: 3129 tcgatcagtttcagaaagacctggcatcaagactatatatgaagatctttcttctatata 3188
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 tcgatcagtttcagaaagacctggcatcaagactatatatgaagatcttttttctatata 241
Query: 3189 gttt 3192
||||
Sbjct: 240 gttt 237