Miyakogusa Predicted Gene

Lj0g3v0361479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0361479.1 Non Chatacterized Hit- tr|H9WPP8|H9WPP8_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,93.75,0.0000002,seg,NULL; coiled-coil,NULL,CUFF.24899.1
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61661                                                      674   0.0  

>gnl|LJGI|TC61661 
          Length = 699

 Score =  674 bits (340), Expect = 0.0
 Identities = 343/344 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgctgcgaataaaggcagtggtggataagtttgtggaggagttgaaggaagcattg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgtcgctgcgaataaaggcagtggtggataagtttgtggaggagttgaaggaagcattg 208

                                                                       
Query: 61  gatgctgatattcaggataggatcatgaaagacagagagatgcagagttacatccaagaa 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 209 gatgctgatattcaggataggatcatgagagacagagagatgcagagttacatccaagaa 268

                                                                       
Query: 121 cgtgagcgtgaggttgcggagcgtgaagctgcttggaaggccgatctttctcgtcgtgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cgtgagcgtgaggttgcggagcgtgaagctgcttggaaggccgatctttctcgtcgtgag 328

                                                                       
Query: 181 gcagagattgctcgtcaagaagcaagactgaagatggaaagagacaatcttgagaaagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcagagattgctcgtcaagaagcaagactgaagatggaaagagacaatcttgagaaagag 388

                                                                       
Query: 241 aaaagtgtgttaatgggaactgcatcaaatcaagataaccaagatggagctcttgaaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaaagtgtgttaatgggaactgcatcaaatcaagataaccaagatggagctcttgaaatt 448

                                                       
Query: 301 acagtgagtggtgaaaagtaccgttgcctcagatttaccaaggc 344
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acagtgagtggtgaaaagtaccgttgcctcagatttaccaaggc 492