Miyakogusa Predicted Gene

Lj0g3v0361229.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0361229.2 Non Chatacterized Hit- tr|I1LAD8|I1LAD8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,50,0.000000008,seg,NULL,CUFF.24881.2
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74845 weakly similar to UniRef100_Q70WR3 Cluster: S l...   339   7e-93
gnl|LJGI|AV768074                                                      70   1e-11

>gnl|LJGI|TC74845 weakly similar to UniRef100_Q70WR3 Cluster: S locus F-box (SLF)-S1E
           protein; n=1; Antirrhinum hispanicum|Rep: S locus F-box
           (SLF)-S1E protein - Antirrhinum hispanicum (Snapdragon),
           partial (5%)
          Length = 888

 Score =  339 bits (171), Expect = 7e-93
 Identities = 171/171 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagagtataaagggcagtcttcttggactaaatcttttgttatctctgtttatgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atgaaagagtataaagggcagtcttcttggactaaatcttttgttatctctgtttatgcc 295

                                                                       
Query: 61  cccatgcactttttgccaatttggtctacccaaggtggtggtgttttaggatctgatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cccatgcactttttgccaatttggtctacccaaggtggtggtgttttaggatctgatgat 355

                                                              
Query: 121 agtgatagtggaggactgcagaaatttgatgagggagaactgcttgagaag 171
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agtgatagtggaggactgcagaaatttgatgagggagaactgcttgagaag 406


>gnl|LJGI|AV768074 
          Length = 406

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 61/67 (91%), Gaps = 2/67 (2%)
 Strand = Plus / Minus

                                                                       
Query: 220 tatagagaaaacctactaacactccctggtggtgact-ttgaagaaggaaatgaa-atgc 277
           |||||||||| |||||||||||||||||||||||| | |||| |||| ||||||| ||||
Sbjct: 406 tatagagaaagcctactaacactccctggtggtgagtgttgaggaagtaaatgaagatgc 347

                  
Query: 278 ttgacaa 284
           |||||||
Sbjct: 346 ttgacaa 340