Miyakogusa Predicted Gene
- Lj0g3v0360779.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0360779.1 tr|D7L8B8|D7L8B8_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_671772
PE,40,4e-19,seg,NULL; DUF4005,Domain of unknown function DUF4005;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,gene.g28344.t1.1
(637 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63087 similar to UniRef100_A7PSZ4 Cluster: Chromosome... 1124 0.0
gnl|LJGI|TC75496 similar to UniRef100_A7PSZ4 Cluster: Chromosome... 389 e-107
gnl|LJGI|TC66614 similar to UniRef100_A7PSZ4 Cluster: Chromosome... 167 1e-40
>gnl|LJGI|TC63087 similar to UniRef100_A7PSZ4 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 919
Score = 1124 bits (567), Expect = 0.0
Identities = 584/592 (98%)
Strand = Plus / Plus
Query: 46 gaacgatggatggcaggcgccgagtgccagaacctgacagcgaaagagaagaacgaccaa 105
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gaacgatggatggcaggcgccgagtgccagaacgtgacagcgaaagagaagaacgaccaa 60
Query: 106 tcatctgcaaaaagttcaagccgcatgattaccagcgctgagatcagcaaatcctttgct 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatctgcaaaaagttcaagccgcatgattaccagcgctgagatcagcaaatcctttgct 120
Query: 166 cgtttccagctcaattccgaaaatcattctccaaccgccagccaaaatcccggctcacct 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtttccagctcaattccgaaaatcattctccaaccgccagccaaaatcccggctcacct 180
Query: 226 aacttccagtcccattctaatcctccgaagccagcagccagtaagaaactgaagaaggca 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacttccagtcccattctaatcctccgaagccagcagccagtaagaaactgaagaaggca 240
Query: 286 agcccacgggacagccgggttatggatgatgacatgaaaagcatggtaagtatgcaatca 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcccacgggacagccgggttatggatgatgacatgaaaagcatggtaagtatgcaatca 300
Query: 346 gaaaggaggcactcgattgcgggatcaacaatcagagatgatgaaagccttgcaagctct 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaaggaggcactcgattgcgggatcaacaatcagagatgatgaaagccttgcaagctct 360
Query: 406 ccatcagttgttccaagttacatggtgccaactaaatctgcaaaagctaagtccaggatg 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatcagttgttccaagttacatggtgccaactaaatctgcaaaagctaagtccaggatg 420
Query: 466 caaagtccattagctgctgagaatggaaccccagagaannnnnnntttgggactgcaaag 525
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 caaagtccattagctgctgagaatggaaccccagagaagggggggtttgggactgcaaag 480
Query: 526 aaaaggctatctttcccggcttcccccgccagaccgaggcggcattcaggtccaccaaag 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaaggctatctttcccggcttcccccgccagaccgaggcggcattcaggtccaccaaag 540
Query: 586 gtagacagcagcttgaatgcagaaatcactgttggcaatggtgtggctggtt 637
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtagacagcagcttgaatgcagaaatcactgttggcaatggtgtggctggtt 592
>gnl|LJGI|TC75496 similar to UniRef100_A7PSZ4 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1169
Score = 389 bits (196), Expect = e-107
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 1 atgttcatggatcctaccaatccttcctggggttggagctggttggaacgatggatggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 atgttcatggatcctaccaatccttcctggggttggagctggttggaacgatggatggca 972
Query: 61 ggcgccgagtgccagaacctgacagcgaaagagaagaacgaccaatcatctgcaaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 ggcgccgagtgccagaacctgacagcgaaagagaagaacgaccaatcatctgcaaaaagt 1032
Query: 121 tcaagccgcatgattaccagcgctgagatcagcaaatcctttgctcgtttccagctcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 tcaagccgcatgattaccagcgctgagatcagcaaatcctttgctcgtttccagctcaat 1092
Query: 181 tccgaaaatcattctc 196
||||||||||||||||
Sbjct: 1093 tccgaaaatcattctc 1108
>gnl|LJGI|TC66614 similar to UniRef100_A7PSZ4 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 1064
Score = 167 bits (84), Expect = 1e-40
Identities = 482/617 (78%), Gaps = 15/617 (2%)
Strand = Plus / Plus
Query: 1 atgttcatggatcctaccaatccttcctggggttggagctggttggaacgatggatggca 60
|||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 77 atgttcatggatccaaccaatcctacctggggatggagctggttggaaagatggatggca 136
Query: 61 ggcgc------cgagtgccagaacctgacagcgaaagagaagaacgaccaatcatctgca 114
| | |||| | | ||||| | | |||||| ||| || || ||||||| |
Sbjct: 137 gcccggtcctacgagagtcgtaaccttatggataaagagctgaatgatcattcatctgta 196
Query: 115 aaaagttcaagccgcatgattaccagcgctgagatcagcaaatcctttgctcgtttccag 174
| |||||| ||||||| ||||| | | || |||| || ||| |||||||||||||||
Sbjct: 197 agaagttctagccgcagcattactggtggagaaatcaacagatcatttgctcgtttccag 256
Query: 175 ctcaattccgaaaatcattctccaaccgccagccaaaatcccggctcacctaacttccag 234
|||||||| |||| ||||||||| | |||||||||||| | |||||||||| ||| |||
Sbjct: 257 ctcaattctgaaatccattctccagcagccagccaaaatgcaggctcacctagctttcag 316
Query: 235 tcccattctaatcctccgaagccagcagccagtaagaaactgaagaaggcaagcccacgg 294
|| | || | |||| | | | |||| | |||||||| |||||||| || |||| |
Sbjct: 317 cccaactcaactccttccaggacagcttctgctaagaaaccgaagaaggtaaccccaaag 376
Query: 295 gacagccgggttatggatgatgacatgaaaagcatggtaagtatgcaatcagaaagg--- 351
| || | ||||||||||||| ||| ||||| |||| ||| | || ||||| ||
Sbjct: 377 ggcaactgggttatggatgacgactccaaaagtatggccagtgtacagtcagaccggttc 436
Query: 352 ---aggcactcgattgcgggatcaacaatcagagatgatgaaagccttgcaagctctcca 408
|||||||| ||||| || ||| || | ||||||||||| |||||||| |||||||||
Sbjct: 437 cggaggcactccattgctgggtcatcagtgagagatgatgagagccttgctagctctcca 496
Query: 409 tcagttgttccaagttacatggtgccaactaaatctgcaaaagctaagtccaggatgcaa 468
|||||| |||||||| |||||||| ||| |||||||||||||||||||||||| ||
Sbjct: 497 tcagtt---ccaagttatatggtgccgactcaatctgcaaaagctaagtccaggacacag 553
Query: 469 agtccattagctgctgagaatggaaccccagagaannnnnnntttgggactgcaaagaaa 528
||||||||||| | || ||||| | | || || ||||| |||||||||||
Sbjct: 554 agtccattagccccagaaaatgggaaagccgaaaaagggtcctttggaactgcaaagaag 613
Query: 529 aggctatctttcccggcttcccccgccagaccgaggcggcattcaggtccaccaaaggta 588
| || |||||||| ||||| || |||||||| ||||| |||||||||||||||||||||
Sbjct: 614 cgtctttctttcccagcttcgcctgccagaccaaggcgtcattcaggtccaccaaaggta 673
Query: 589 gacagcagcttgaatgc 605
|| ||||||||||||||
Sbjct: 674 gaaagcagcttgaatgc 690