Miyakogusa Predicted Gene
- Lj0g3v0360299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0360299.1 Non Chatacterized Hit- tr|J3MA83|J3MA83_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G3,85.71,0.0000000000002,seg,NULL; no
description,NULL,CUFF.24803.1
(561 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome... 617 e-176
gnl|LJGI|FS330395 similar to UniRef100_Q9DEU7 Cluster: Transcrip... 210 7e-54
>gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1178
Score = 617 bits (311), Expect = e-176
Identities = 384/407 (94%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 59 agttcacaggtctgcgccatggcttcttctgccgacccacttactctcatgctcaaaaca 118
||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 301 agttcacaggtctgcaccatggcttcttctgcagacccacttgctctcatgctcaaaaca 360
Query: 119 aagtgcaacccatcaaagcttccgttgctgcacccccatttccattgtttcagcctccca 178
|||||||| |||||||||| || |||||| ||| |||||||||||||||||| |||||||
Sbjct: 361 aagtgcaaaccatcaaagcctc-gttgctacactcccatttccattgtttcaacctccca 419
Query: 179 aagttgaagaaccaacgtctgagttggagcctgcagaccctgacttctataggatcggtt 238
||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||
Sbjct: 420 aagttgaagaatcaacgtctgggttggagcctgcagaccctgacttctaccggataggtt 479
Query: 239 atgttcggagcatgcgagcttacgggattgattttaaggaagggccagatggttttggtg 298
|||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 480 atgtccggagcatgcaagcttacgaaattgattttaaggaagggccagatggttttggtg 539
Query: 299 tgtatgcttccaaagatgtagaacctcttcgccggcctagggttataatggaaattcctc 358
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 540 tgtatgcttccaaagatgtagaacctcttcgccggccaagggttataatagaaattcctc 599
Query: 359 ttgaattgatgctaaccataagcaagaagctaccgtggatgtttttccctgatataattc 418
||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 600 ttgaattgatgctaaccataagcaagatgctactgtggatgcttttccctgatataattc 659
Query: 419 ccattggtcatccaatatttgatattatcaactcgacaaatccagag 465
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ccattggtcatccaatatttgatattatcaactcgacaaatccagag 706
>gnl|LJGI|FS330395 similar to UniRef100_Q9DEU7 Cluster: Transcription factor Her-8b;
n=1; Danio rerio|Rep: Transcription factor Her-8b -
Danio rerio (Zebrafish) (Brachydanio rerio), partial
(9%)
Length = 748
Score = 210 bits (106), Expect = 7e-54
Identities = 124/130 (95%)
Strand = Plus / Plus
Query: 35 cacactgcttcttctccaacacccagttcacaggtctgcgccatggcttcttctgccgac 94
|||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||
Sbjct: 619 cacactacttcttctccaacacacagttcacaggtctgcaccatggcttcttctgcagac 678
Query: 95 ccacttactctcatgctcaaaacaaagtgcaacccatcaaagcttccgttgctgcacccc 154
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 679 ccacttactctcatgctcaaaacaaagtgcaacccatcaaagcttccgttgcagcactcc 738
Query: 155 catttccatt 164
||||||||||
Sbjct: 739 catttccatt 748