Miyakogusa Predicted Gene

Lj0g3v0359799.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0359799.1 Non Chatacterized Hit- tr|C5XYY7|C5XYY7_SORBI
Putative uncharacterized protein Sb04g008610
OS=Sorghu,28.48,8e-18,coiled-coil,NULL; seg,NULL,CUFF.24775.1
         (1375 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62592 weakly similar to UniRef100_Q6TUE7 Cluster: LRR...   603   e-171
gnl|LJGI|GO007478                                                     555   e-157

>gnl|LJGI|TC62592 weakly similar to UniRef100_Q6TUE7 Cluster: LRRGT00097; n=1; Rattus
            norvegicus|Rep: LRRGT00097 - Rattus norvegicus (Rat),
            partial (4%)
          Length = 809

 Score =  603 bits (304), Expect = e-171
 Identities = 307/308 (99%)
 Strand = Plus / Plus

                                                                        
Query: 742  gcatcaaaagacgaggcttttgaagaatctaatatgaatgggcaactcttgcttaatgag 801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gcatcaaaagacgaggcttttgaagaatctaatatgaatgggcaactcttgcttaatgag 60

                                                                        
Query: 802  ctgcagaagcgagatgacgagattgatcgtttgcataaagcaaagatagaagagagtcaa 861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctgcagaagcgagatgacgagattgatcgtttgcataaagcaaagatagaagagagtcaa 120

                                                                        
Query: 862  aggagacagatggaaatgtatcggctcgagaaggaactttatatgatgcaaagccttgtg 921
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aggagacagatggaaatgtatcggctcgagaaggaactttatatgatgcaaagccttgtg 180

                                                                        
Query: 922  gagggctacagaaaagccatgaaagaaacacaaaaggcttttgctgaatatagagcacgc 981
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gagggttacagaaaagccatgaaagaaacacaaaaggcttttgctgaatatagagcacgc 240

                                                                        
Query: 982  tgtccgcaagctgatgaaccactttacaaggacgttcctgggtctgggggccttgttttg 1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgtccgcaagctgatgaaccactttacaaggacgttcctgggtctgggggccttgttttg 300

                    
Query: 1042 agtgtgac 1049
            ||||||||
Sbjct: 301  agtgtgac 308



 Score =  357 bits (180), Expect = 1e-97
 Identities = 183/184 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1120 tttggagatgttgagctaacttatatgggtgaactggaaagtcatatgatcgtaattgaa 1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379  tttggagatgttgagctaacttatatgggtgaactggaaagtcatatgatcgtaattgaa 438

                                                                        
Query: 1180 tcctttaatgacaggttgatggctatggagaaccaagtaaaacatttgaaagaagtgaaa 1239
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 439  tcctttaatgacaggttgatgactatggagaaccaagtaaaacatttgaaagaagtgaaa 498

                                                                        
Query: 1240 gctaaaagcaaggtttctgatccgcctgaatgtgctccaactagtgaagcacaaactgct 1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  gctaaaagcaaggtttctgatccgcctgaatgtgctccaactagtgaagcacaaactgct 558

                
Query: 1300 gaag 1303
            ||||
Sbjct: 559  gaag 562


>gnl|LJGI|GO007478 
          Length = 486

 Score =  555 bits (280), Expect = e-157
 Identities = 286/288 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacaaggtggatgggagtgatgatgtggaaatgggtggggtcgatgttgatgagagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atggacaaggtggatgggagtgatgatgtggaaatgggtggggtcgatgttgatgagagt 258

                                                                       
Query: 61  cgtgttcctgggttggaggagcacaacattgaattgagtctggggcaagataatgctgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cgtgttcctgggttggaggagcacaacattgaattgagtctggggcaagataatgctgag 318

                                                                       
Query: 121 agaggtgaagtggaacaggagcagggtggagaggaacggataatgatggagtttgagctg 180
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 agagttgaagtggaacaggagcagggtggagaggaacggataatgatggattttgagctg 378

                                                                       
Query: 181 tctaaggaagaagaacctgggatgtggcttatagatcagaggaacaatgtgggggagccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctaaggaagaagaacctgggatgtggcttatagatcagaggaacaatgtgggggagccc 438

                                                           
Query: 241 tttttgcggcaatgtcgtaatgttgatgtgaatggtatggactgtggt 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttttgcggcaatgtcgtaatgttgatgtgaatggtatggactgtggt 486