Miyakogusa Predicted Gene

Lj0g3v0359769.2
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0359769.2 Non Chatacterized Hit- tr|I1KNT0|I1KNT0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56401
PE,84.49,0,FAD/NAD(P)-binding domain,NULL; no description,NULL;
SUBFAMILY NOT NAMED,NULL; PHYTOENE DEHYDROGENAS,CUFF.24762.2
         (1698 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS360814                                                     176   3e-43
gnl|LJGI|TC74145                                                       72   1e-11

>gnl|LJGI|FS360814 
          Length = 617

 Score =  176 bits (89), Expect = 3e-43
 Identities = 141/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Minus

                                                                       
Query: 564 aggagatttgggtgttctttacactgctgcagctagatatgcccc-ttctctttttaagt 622
           |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 617 aggatatttgggtgttctttacactgctgcagctagatatgcccccttttctttttaagt 558

                                                                       
Query: 623 cctttgttcaaatggggcctcagggtgctcttggggctacaaaacttctcagacctttca 682
           ||||| |||||||||||| ||| ||| |||||  ||| ||| ||||||| ||||||||| 
Sbjct: 557 cctttcttcaaatggggcatcaaggttctcttaaggccacataacttcttagacctttct 498

                                                
Query: 683 aggaaatacttgacggtttggaactcaaagacccttt 719
            |||||||||||| ||||||||||| |||||||||||
Sbjct: 497 tggaaatacttgatggtttggaactgaaagacccttt 461



 Score =  103 bits (52), Expect = 4e-21
 Identities = 123/146 (84%), Gaps = 3/146 (2%)
 Strand = Plus / Minus

                                                                       
Query: 797 tttacatgtttgctgaatggtacaaacctggatgctgtcttgagtaccctcttgatggaa 856
           ||||||||||||| ||||||||||||| ||||| |||||||||||||   |||  |||||
Sbjct: 262 tttacatgtttgcagaatggtacaaacttggatcctgtcttgagtactagctttctggaa 203

                                                                       
Query: 857 ctgcagctatagttgatgctctagtacgaggattggagaagtttggcggacgggtttcgc 916
           |||||||||| ||||||||||| ||| |||||   ||||||||  |||||| | |||| |
Sbjct: 202 ctgcagctattgttgatgctcttgtaggagga---gagaagttgcgcggacagatttctc 146

                                     
Query: 917 ttcaaagtcacgctgagaagatcgtt 942
           |||| ||||| |  ||||||||||||
Sbjct: 145 ttcatagtcatgtcgagaagatcgtt 120


>gnl|LJGI|TC74145 
          Length = 718

 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 797 tttacatgtttgctgaatggtacaaacctggatgctgtcttgagtacc 844
           ||||||||||||| ||| ||||||||||||||| ||||||||||||||
Sbjct: 218 tttacatgtttgcagaaaggtacaaacctggatcctgtcttgagtacc 265