Miyakogusa Predicted Gene
- Lj0g3v0359559.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0359559.1 Non Chatacterized Hit- tr|I3SNA4|I3SNA4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.39,0,Usp,UspA;
UNVRSLSTRESS,Universal stress protein A; no description,Rossmann-like
alpha/beta/alpha san,CUFF.24860.1
(501 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59956 similar to UniRef100_A7Q0B5 Cluster: Chromosome... 993 0.0
gnl|LJGI|TC71428 similar to UniRef100_Q6T7D1 Cluster: Fiber prot... 930 0.0
gnl|LJGI|TC81927 weakly similar to UniRef100_A7Q0B5 Cluster: Chr... 626 e-179
gnl|LJGI|TC63697 similar to UniRef100_A7Q0B5 Cluster: Chromosome... 571 e-162
gnl|LJGI|AW720618 homologue to UniRef100_Q9SLR7 Cluster: Thiamin... 394 e-109
gnl|LJGI|TC82504 similar to UniRef100_Q4VSM2 Cluster: Universal ... 218 3e-56
gnl|LJGI|TC63265 similar to UniRef100_A7Q026 Cluster: Chromosome... 56 2e-07
>gnl|LJGI|TC59956 similar to UniRef100_A7Q0B5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 739
Score = 993 bits (501), Expect = 0.0
Identities = 501/501 (100%)
Strand = Plus / Plus
Query: 1 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 90
Query: 61 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 150
Query: 121 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 210
Query: 181 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 270
Query: 241 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 330
Query: 301 gtagtggaagcggtggaaggtgatcctagaaatgttctttgcgaagccgtggagaagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtagtggaagcggtggaaggtgatcctagaaatgttctttgcgaagccgtggagaagtat 390
Query: 361 cacgcttcagtgttggttgtgggtagtcatggttatggggctctgaaaagggcggttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cacgcttcagtgttggttgtgggtagtcatggttatggggctctgaaaagggcggttttg 450
Query: 421 ggaagtgtgagtgactattgtgctcatcatgctcactgctctgtgatgatcgtgaagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ggaagtgtgagtgactattgtgctcatcatgctcactgctctgtgatgatcgtgaagaag 510
Query: 481 ccaaaaaccaaacactaatct 501
|||||||||||||||||||||
Sbjct: 511 ccaaaaaccaaacactaatct 531
>gnl|LJGI|TC71428 similar to UniRef100_Q6T7D1 Cluster: Fiber protein Fb19; n=1;
Gossypium barbadense|Rep: Fiber protein Fb19 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (91%)
Length = 712
Score = 930 bits (469), Expect = 0.0
Identities = 492/501 (98%), Gaps = 9/501 (1%)
Strand = Plus / Plus
Query: 1 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 76
Query: 61 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 136
Query: 121 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 196
Query: 181 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ccag---------gagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 247
Query: 241 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 307
Query: 301 gtagtggaagcggtggaaggtgatcctagaaatgttctttgcgaagccgtggagaagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtagtggaagcggtggaaggtgatcctagaaatgttctttgcgaagccgtggagaagtat 367
Query: 361 cacgcttcagtgttggttgtgggtagtcatggttatggggctctgaaaagggcggttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cacgcttcagtgttggttgtgggtagtcatggttatggggctctgaaaagggcggttttg 427
Query: 421 ggaagtgtgagtgactattgtgctcatcatgctcactgctctgtgatgatcgtgaagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggaagtgtgagtgactattgtgctcatcatgctcactgctctgtgatgatcgtgaagaag 487
Query: 481 ccaaaaaccaaacactaatct 501
|||||||||||||||||||||
Sbjct: 488 ccaaaaaccaaacactaatct 508
>gnl|LJGI|TC81927 weakly similar to UniRef100_A7Q0B5 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 420
Score = 626 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Plus
Query: 1 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 93 atggcgacttcttcagactcagagaagaaacagggtatggtgatcggcatcgacgacagc 152
Query: 61 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 212
Query: 121 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttcaagcttgttcttgtccatgccagaccttctgctacttccgctgttggcttcgctggc 272
Query: 181 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 332
Query: 241 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaatataactgatgtc 392
Query: 301 gtagtggaagcggtggaaggtgatccta 328
||| ||||||||||||||||||||||||
Sbjct: 393 gtactggaagcggtggaaggtgatccta 420
>gnl|LJGI|TC63697 similar to UniRef100_A7Q0B5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 724
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atggcgacttcttcagactcagagaagaaacaggttatggtgatcggcatcgacgacagc 61
Query: 61 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagcacagcgtctacgccatcaattggactctcgaccatttcttcgccaagaacccttcc 121
Query: 121 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcaagcttgttcttgttcatgccagaccttctgctacttccgctgttggcttcgctggc 181
Query: 181 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccagtgtatgcaggagctgctgaggttttgcctattgtcgattccgatttgaaaaagatt 241
Query: 241 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaat 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctgctagagttcttgaaaacgctaagcaaatttgcattaaaaacaat 289
>gnl|LJGI|AW720618 homologue to UniRef100_Q9SLR7 Cluster: Thiamin biosynthetic enzyme;
n=1; Glycine max|Rep: Thiamin biosynthetic enzyme -
Glycine max (Soybean), partial (9%)
Length = 347
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Minus
Query: 142 gccagaccttctgctacttccgctgttggcttcgctggcccagtgtatgcaggagctgct 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gccagaccttctgctacttccgctgttggcttcgctggcccagtgtatgcaggagctgct 140
Query: 202 gaggttttgcctattgtcgattccgatttgaaaaagattgctgctagagttcttgaaaac 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gaggttttgcctattgtcgattccgatttgaaaaagattgctgctagagttcttgaaaac 80
Query: 262 gctaagcaaatttgcattaaaaacaatataactgatgtcgtagtggaagcggtggaaggt 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gctaagcaaatttgcattaaaaacaatataactgatgtcgtagtggaagcggtggaaggt 20
Query: 322 gatcctagaaatgttcttt 340
|||||||||||||||||||
Sbjct: 19 gatcctagaaatgttcttt 1
>gnl|LJGI|TC82504 similar to UniRef100_Q4VSM2 Cluster: Universal stress protein; n=1;
Hordeum vulgare subsp. vulgare|Rep: Universal stress
protein - Hordeum vulgare var. distichum (Two-rowed
barley), partial (51%)
Length = 659
Score = 218 bits (110), Expect = 3e-56
Identities = 167/186 (89%)
Strand = Plus / Minus
Query: 316 gaaggtgatcctagaaatgttctttgcgaagccgtggagaagtatcacgcttcagtgttg 375
||||||||| ||||||||||||| ||||| | ||||||||| | || |||||| | |||
Sbjct: 386 gaaggtgatgctagaaatgttctctgcgatgttgtggagaagcaccatgcttcaatattg 327
Query: 376 gttgtgggtagtcatggttatggggctctgaaaagggcggttttgggaagtgtgagtgac 435
||||||||||||||||||||||||||| | |||||||||||||| || ||||| ||||||
Sbjct: 326 gttgtgggtagtcatggttatggggctatcaaaagggcggttttagggagtgtaagtgac 267
Query: 436 tattgtgctcatcatgctcactgctctgtgatgatcgtgaagaagccaaaaaccaaacac 495
|||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 266 tattgtgctcatcatgctcattgcactgtgatgattgtgaagaagccaaaaaccaaacac 207
Query: 496 taatct 501
| ||||
Sbjct: 206 tgatct 201
>gnl|LJGI|TC63265 similar to UniRef100_A7Q026 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 752
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 421 ggaagtgtgagtgactattgtgctcatcatgc 452
||||||||||||||||||||||| ||||||||
Sbjct: 515 ggaagtgtgagtgactattgtgcacatcatgc 546