Miyakogusa Predicted Gene
- Lj0g3v0359279.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0359279.1 tr|Q3T7F3|Q3T7F3_9SOLN Hcr9-Avr4-chm1 OS=Solanum
chmielewskii PE=4 SV=1,30.21,2e-18,no description,NULL; RNI-like,NULL;
L domain-like,NULL; Leucine-rich repeats, typical (most
populate,CUFF.24726.1
(1806 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598178 weakly similar to UniRef100_A7QK47 Cluster: Ch... 1102 0.0
gnl|LJGI|GO022121 weakly similar to UniRef100_A7Q7U7 Cluster: Ch... 811 0.0
>gnl|LJGI|DC598178 weakly similar to UniRef100_A7QK47 Cluster: Chromosome chr16
scaffold_110, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_110, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 588
Score = 1102 bits (556), Expect = 0.0
Identities = 569/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 atggggcatctctcattgc-tatttggaatcattctgtgtttgctttttgaatttccatc 59
||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 17 atggggcatctctcattgcgtgtgtggaatcattctgtgtttgctttttgaatttccatc 76
Query: 60 cttttccttctcttcttcacattcctcatgtcttcccgaccaaagctctgccttgcttca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cttttccttctcttcttcacattcctcatgtcttcccgaccaaagctctgccttgcttca 136
Query: 120 atttaaggcttccttcaccattggtgcttcttttgcacctttactctttgatgtgcgaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atttaaggcttccttcaccattggtgcttcttttgcacctttactctttgatgtgcgaga 196
Query: 180 gacttatgcttatctagataagacagcaacatgggaaaatggaacagattgctgctcatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gacttatgcttatctagataagacagcaacatgggaaaatggaacagattgctgctcatg 256
Query: 240 gcttggtgtcacgtgtgaccgcgtctctggtcacgtgattggcctcgacctcagctgtgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcttggtgtcacgtgtgaccgcgtctctggtcacgtgattggcctcgacctcagctgtgc 316
Query: 300 agggcttgaaggtaaaatccatcccaatagtacccttttccatcttactcatcttcagac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agggcttgaaggtaaaatccatcccaatagtacccttttccatcttactcatcttcagac 376
Query: 360 actcaaccttgctttcaatgatttctcctattctcacttgccatctcagtttggtagtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 actcaaccttgctttcaatgatttctcctattctcacttgccatctcagtttggtagtct 436
Query: 420 tgcgagtctcacacacctcaacttgagtaatatggacttctttggtgaaattccctccca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgcgagtctcacacacctcaacttgagtaatatggacttctttggtgaaattccctccca 496
Query: 480 aatatcacacctttccaaattagactcattggatctctcttggaatggattagagtggaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aatatcacacctttccaaattagactcattggatctctcttggaatggattagagtggaa 556
Query: 540 agaaaccacttggaggaggctactgcaaaata 571
||||||||||||||||||||||||||||||||
Sbjct: 557 agaaaccacttggaggaggctactgcaaaata 588
>gnl|LJGI|GO022121 weakly similar to UniRef100_A7Q7U7 Cluster: Chromosome chr18
scaffold_61, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_61, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 600
Score = 811 bits (409), Expect = 0.0
Identities = 475/497 (95%)
Strand = Plus / Plus
Query: 808 ctttcagcatgtgaactccaaggttcgatccttccctctttctctaacttctcacacctt 867
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 1 ctttcagcatgtgaactccaaggttcgatccctccctctttctctaacctctcacacctt 60
Query: 868 acatccttgactctctctttgaacaacatcaatggttcaattccatcctcacttttaacc 927
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatccttgactctctctgacaacaacatcaatggttcaattccatcctcacttttaacc 120
Query: 928 cttccatctctaacttctttggatctcagttcgaatgatcttagtggccaaatcccagat 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttccatctctaacttctttggatctcagttcgaatgatcttagtggccaaatcccagat 180
Query: 988 gtctttcctcagtcaaacagctttcagaaattacaattgagttggaacaacataggaggt 1047
|| |||||| |||||||||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 181 gtttttcctaagtcaaacagatttcaagaattacaattgagggaaaacaaaataggaggg 240
Query: 1048 gtgttgccttcatcactgtcaaaccttcaccatctcattctcttgggcctttcatacaac 1107
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgttgccactatcactgtcaaaccttcaccatctcattctcttgggcctttcatacaac 300
Query: 1108 aaatttagcggtcaaatcccaaatgtgtttggtgggctaaccaaattgaaaacactcgac 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatttagcggtcaaatcccaaatgtgtttggtgggctaaccaaattgaaaacactcgac 360
Query: 1168 cttggatataataatttcagaggacaaatcccatcttctttgtttgacttgactcaactt 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttggatataataatttcagaggacaaatcccatcttctttgtttgacttgactcaactt 420
Query: 1228 tctatcttggactgttcttctaataaactagaaggtcctctgcccaagaagataacaggg 1287
||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 421 tcttacttggactgttcttctaataaactggaaggtcctctgcccaagaagataacaggg 480
Query: 1288 ctttcaaacctaactat 1304
|||||||||||||||||
Sbjct: 481 ctttcaaacctaactat 497
Score = 56.0 bits (28), Expect = 8e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1410 tataagtgcaatctcatcatattcatta 1437
||||||||||||||||||||||||||||
Sbjct: 495 tataagtgcaatctcatcatattcatta 522