Miyakogusa Predicted Gene
- Lj0g3v0359189.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0359189.2 Non Chatacterized Hit- tr|I3T8I3|I3T8I3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.16,0,HLH,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding domain,Helix-loop-helix domain; coile,CUFF.24722.2
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome... 1366 0.0
gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome... 1013 0.0
gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome... 305 2e-82
gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome... 297 5e-80
gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome... 68 8e-11
gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chr... 60 2e-08
>gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1065
Score = 1366 bits (689), Expect = 0.0
Identities = 708/717 (98%)
Strand = Plus / Plus
Query: 1 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacgatattccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacgatattccc 185
Query: 61 gcccctgaggtcaccttcactgtccctccctccggattcccctggccctcctctcaaccc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 186 gcccctgaggtcaccttcactgtccctccctccggattcacctggccctcctctcaaccc 245
Query: 121 ttgaattcctcttccaatgtcgtcggtgttgagattgatggctcattaggggattctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgaattcctcttccaatgtcgtcggtgttgagattgatggctcattaggggattctgac 305
Query: 181 agtctcaaagagcctggttcgaagaagagggtcagatctgagtcatgttctgctactagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtctcaaagagcctggttcgaagaagagggtcagatctgagtcatgttctgctactagc 365
Query: 241 tccaaagcatgccgggagaagttgcgtcgagacaaacttaatgacaagtttgttgaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tccaaagcatgccgggagaagttgcgtcgagacaaacttaatgacaagtttgttgaactg 425
Query: 301 ggctccatattggagcctggaagacctcccaaaacagacaaggctgctatcctgattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggctccatattggagcctggaagacctcccaaaacagacaaggctgctatcctgattgat 485
Query: 361 gctgtccgaatggtgactcagttaaggggtgaagcccagaagatgaaagacactaatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gctgtccgaatggtgactcagttaaggggtgaagcccagaagatgaaagacactaatatg 545
Query: 421 ggtcttcaagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggtcttcaagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 605
Query: 481 cagaggctcaagacagagaaagagaggttggagcagcagctgaaatctatgaatgcacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cagaggctcaagacagagaaagagaggttggagcagcagctgaaatctatgaatgcacaa 665
Query: 541 cctagtttcatgnnnnnnnntcaagcactccctgctgcattcgctgcacaaggccaagcc 600
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cctagtttcatgcccccccctcaagcactccctgctgcattcgctgcacaaggccaagcc 725
Query: 601 catggcaacaagttagtgccatttatcagctatccaggagttgccatgtggcaattcttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 catggcaacaagttagtgccatttatcagctatccaggagttgccatgtggcaattcttg 785
Query: 661 cctcctgctgcgcgtgatacctcacaggatcacgagcttcgtccaccagttgcctaa 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 cctcctgctgcgcgtgatacctcacaggatcacgagcttcgtccaccagttgcctaa 842
>gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 721
Score = 1013 bits (511), Expect = 0.0
Identities = 531/535 (99%), Gaps = 2/535 (0%)
Strand = Plus / Plus
Query: 1 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacgatattccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacgatattccc 248
Query: 61 gcccctgaggtcaccttcactgtccctccctccggattcccctggccctcctctcaaccc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 249 gcccctgaggtcaccttcactgtccctccctccggattcacctggccctcctctcaaccc 308
Query: 121 ttgaattcctcttccaatgtcgtcggtgttgagattgatggctcattaggggattctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgaattcctcttccaatgtcgtcggtgttgagattgatggctcattaggggattctgac 368
Query: 181 agtctcaaagagcctggttcgaagaagagggtcagatctgagtcatgttctgctactagc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agtctcaaagagcctggctcgaagaagagggtcagatctgagtcatgttctgctactagc 428
Query: 241 tccaaagcatgccgggagaagttgcgtcgagacaaacttaatgacaagtttgttgaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tccaaagcatgccgggagaagttgcgtcgagacaaacttaatgacaagtttgttgaactg 488
Query: 301 ggctccatattggagcctggaagacctcccaaaacagacaaggctgctatcctgattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggctccatattggagcctggaagacctcccaaaacagacaaggctgctatcctgattgat 548
Query: 361 gctgtccgaatggtgactcagttaaggggtgaagcccagaagatgaaagacactaatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gctgtccgaatggtgactcagttaaggggtgaagcccagaagatgaaagacactaatatg 608
Query: 421 ggtcttcaagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggtcttcaagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 668
Query: 481 cagaggctcaagacagagaaagagaggttggagcagcagctgaaatctatgaatg 535
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 669 caga-gctcaagacagagaaagagagg-tggagcagcagctgaaatctatgaatg 721
>gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 769
Score = 305 bits (154), Expect = 2e-82
Identities = 334/394 (84%)
Strand = Plus / Plus
Query: 142 gtcggtgttgagattgatggctcattaggggattctgacagtctcaaagagcctggttcg 201
||||| ||||| ||||||||||| | ||||||| ||| | |||||||| |||||| |
Sbjct: 279 gtcggggttgaaattgatggctccctgggggattttgatgggctcaaagatcctggtgtg 338
Query: 202 aagaagagggtcagatctgagtcatgttctgctactagctccaaagcatgccgggagaag 261
|||||||||| ||| |||| |||||| | || ||||||| ||||| ||||||||||||
Sbjct: 339 aagaagaggggtagaactgattcatgtgcaccttctagctctaaagcttgccgggagaag 398
Query: 262 ttgcgtcgagacaaacttaatgacaagtttgttgaactgggctccatattggagcctgga 321
||||| | || ||||| |||||||||||||| ||| | |||||||| ||||||||||||
Sbjct: 399 ttgcggagggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctgga 458
Query: 322 agacctcccaaaacagacaaggctgctatcctgattgatgctgtccgaatggtgactcag 381
|| |||||||||||||||||||||||||| || || ||||| || ||| ||||||| |||
Sbjct: 459 aggcctcccaaaacagacaaggctgctattcttatagatgcagttcgagtggtgacgcag 518
Query: 382 ttaaggggtgaagcccagaagatgaaagacactaatatgggtcttcaagagaagattaaa 441
|| | |||||||||||||| |||||||| | |||| |||||||||| ||||| |||
Sbjct: 519 ttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaagaaaagataaaa 578
Query: 442 gagttaaagactgagaagaatgagcttcgtgatgagaagcagaggctcaagacagagaaa 501
||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 579 gagttaaaggctgagaagaatgagcttcgtgatgagaaacagaggcttaaagcagagaaa 638
Query: 502 gagaggttggagcagcagctgaaatctatgaatg 535
|||| ||||||||||||| |||||| |||||||
Sbjct: 639 gagaagttggagcagcaggtgaaattaatgaatg 672
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacga 53
|||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 147 atggtttccccggaaaacaccaattggcttttcgattacggcttgatcgacga 199
>gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 764
Score = 297 bits (150), Expect = 5e-80
Identities = 333/394 (84%)
Strand = Plus / Plus
Query: 142 gtcggtgttgagattgatggctcattaggggattctgacagtctcaaagagcctggttcg 201
||||| ||||| ||||||||||| | ||||||| ||| | |||||||| |||||| |
Sbjct: 183 gtcggggttgaaattgatggctccctgggggattttgatgggctcaaagatcctggtgtg 242
Query: 202 aagaagagggtcagatctgagtcatgttctgctactagctccaaagcatgccgggagaag 261
|||||||||| ||| |||| |||||| | || ||||||| ||||| ||||||||||||
Sbjct: 243 aagaagaggggtagaactgattcatgtgcaccttctagctctaaagcttgccgggagaag 302
Query: 262 ttgcgtcgagacaaacttaatgacaagtttgttgaactgggctccatattggagcctgga 321
||||| | || ||||| |||||||||||||| ||| | |||||||| ||||||||||||
Sbjct: 303 ttgcggagggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctgga 362
Query: 322 agacctcccaaaacagacaaggctgctatcctgattgatgctgtccgaatggtgactcag 381
|| |||||||||||||||||||||||||| || || ||||| || ||| ||||||| |||
Sbjct: 363 aggcctcccaaaacagacaaggctgctattcttatagatgcagttcgagtggtgacgcag 422
Query: 382 ttaaggggtgaagcccagaagatgaaagacactaatatgggtcttcaagagaagattaaa 441
|| | |||||||||||||| |||||||| | |||| |||||||||| ||||| |||
Sbjct: 423 ttgcgaggtgaagcccagaacttgaaagactcaaatacaagtcttcaagaaaagataaaa 482
Query: 442 gagttaaagactgagaagaatgagcttcgtgatgagaagcagaggctcaagacagagaaa 501
||||||||| |||||||||||||||||| ||||||||| |||||||| || ||||||||
Sbjct: 483 gagttaaaggctgagaagaatgagcttcttgatgagaaacagaggcttaaagcagagaaa 542
Query: 502 gagaggttggagcagcagctgaaatctatgaatg 535
|||| ||||||||||||| |||||| |||||||
Sbjct: 543 gagaagttggagcagcaggtgaaattaatgaatg 576
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 atggtttcccgggaaaacaccaattggctcttcgattacggtttgatcgacga 53
|||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 51 atggtttccccggaaaacaccaattggcttttcgattacggcttgatcgacga 103
>gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 863
Score = 67.9 bits (34), Expect = 8e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 427 caagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 480
||||| || ||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 425 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaag 478
>gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 648
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 427 caagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 480
||||| || ||||||||||| ||| ||||| |||||||| ||||||||||||||
Sbjct: 502 caagaaaaaattaaagagttgaaggctgaggagaatgagattcgtgatgagaag 555