Miyakogusa Predicted Gene
- Lj0g3v0359149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0359149.1 tr|A9RHV8|A9RHV8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159214,59.7,4e-18,ZF_SP_RING,Zinc finger, MIZ-type;
SUBFAMILY NOT NAMED,NULL; ZINC FINGER MIZ DOMAIN-CONTAINING
PROTEI,CUFF.24713.1
(1527 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59098 weakly similar to UniRef100_Q2HSV7 Cluster: DNA... 1592 0.0
gnl|LJGI|TC73829 similar to UniRef100_Q2HSV7 Cluster: DNA-bindin... 880 0.0
gnl|LJGI|BP067244 similar to UniRef100_Q2HSV7 Cluster: DNA-bindi... 474 e-133
gnl|LJGI|TC71155 similar to UniRef100_A7NZG1 Cluster: Chromosome... 335 5e-91
>gnl|LJGI|TC59098 weakly similar to UniRef100_Q2HSV7 Cluster: DNA-binding SAP; Zinc
finger, MIZ-type; Zinc finger, FYVE/PHD-type; n=1;
Medicago truncatula|Rep: DNA-binding SAP; Zinc finger,
MIZ-type; Zinc finger, FYVE/PHD-type - Medicago
truncatula (Barrel medic), partial (16%)
Length = 803
Score = 1592 bits (803), Expect = 0.0
Identities = 803/803 (100%)
Strand = Plus / Plus
Query: 223 cttggtttagggaatcttgtgcaatggcactctcccaatggatccctctgtgtttctact 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttggtttagggaatcttgtgcaatggcactctcccaatggatccctctgtgtttctact 60
Query: 283 gatggagatgttaaaaaagcagaagcattgaagtatgtcaaacaggaagctgtttcagag 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggagatgttaaaaaagcagaagcattgaagtatgtcaaacaggaagctgtttcagag 120
Query: 343 ggtcatactggtctaaaaattggcataaaaaagaatcgcaatggactttgggaactcagc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtcatactggtctaaaaattggcataaaaaagaatcgcaatggactttgggaactcagc 180
Query: 403 aagcctgaggacacaaacacatcttctagtcatagattaaaagaggtatttggaaatcct 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagcctgaggacacaaacacatcttctagtcatagattaaaagaggtatttggaaatcct 240
Query: 463 gaacaggttgttattccgatgagcagcagtgccacaggaagtggatgggacggtgatgat 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacaggttgttattccgatgagcagcagtgccacaggaagtggatgggacggtgatgat 300
Query: 523 cgtagtgtaaaccagggtggtggtgggcatattgaatgttctactgcaaatgggactgag 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtagtgtaaaccagggtggtggtgggcatattgaatgttctactgcaaatgggactgag 360
Query: 583 atggattctctctgtctcaataatgttgatttagcatacggatatactgcacctagcact 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggattctctctgtctcaataatgttgatttagcatacggatatactgcacctagcact 420
Query: 643 tctgctcaggtgggtggtgcagaagtaattgttcttagtgattctgatgaagataatgat 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgctcaggtgggtggtgcagaagtaattgttcttagtgattctgatgaagataatgat 480
Query: 703 atattagtatcttcggctattgcatataagaacgaccaaaatgataatgcagatggtttc 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattagtatcttcggctattgcatataagaacgaccaaaatgataatgcagatggtttc 540
Query: 763 tctataccaccgcctgggattgttgattcatatgcagaagatcagaatcttggcggaaat 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctataccaccgcctgggattgttgattcatatgcagaagatcagaatcttggcggaaat 600
Query: 823 tcatgcttgggactttttcctaacgaagatgattttgggatgtcttccctatggtcattg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcatgcttgggactttttcctaacgaagatgattttgggatgtcttccctatggtcattg 660
Query: 883 ccttctacatctcaggctggtccaggattccaattatttggttctgatggagatgtgtcg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccttctacatctcaggctggtccaggattccaattatttggttctgatggagatgtgtcg 720
Query: 943 gatgcattggtccatttgcctggtcctgttaactgcacctcatcactgaacggttatgca 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatgcattggtccatttgcctggtcctgttaactgcacctcatcactgaacggttatgca 780
Query: 1003 ttggctcctgatactgctatggg 1025
|||||||||||||||||||||||
Sbjct: 781 ttggctcctgatactgctatggg 803
>gnl|LJGI|TC73829 similar to UniRef100_Q2HSV7 Cluster: DNA-binding SAP; Zinc finger,
MIZ-type; Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: DNA-binding SAP; Zinc finger, MIZ-type;
Zinc finger, FYVE/PHD-type - Medicago truncatula (Barrel
medic), partial (14%)
Length = 725
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1084 ggcttggttgacaacccattggcatttgctggagatgatccatcgcttcagatttttctc 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcttggttgacaacccattggcatttgctggagatgatccatcgcttcagatttttctc 61
Query: 1144 cccacaagaccagctgagtcatcagtgcagaatgaattaagagatcgggcagatgtgtcc 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cccacaagaccagctgagtcatcagtgcagaatgaattaagagatcgggcagatgtgtcc 121
Query: 1204 aatggtgtctgcactgaggattggatatctcttagtcttggaggtggtgctgctggcagt 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatggtgtctgcactgaggattggatatctcttagtcttggaggtggtgctgctggcagt 181
Query: 1264 aatggcaatgcttccgctcaaaatggattgaattctagaggcaatgcttccattcaaaat 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aatggcaatgcttccgctcaaaatggattgaattctagaggcaatgcttccattcaaaat 241
Query: 1324 ggattgaattctagacatcaagtcccagccatggatgatgacacacatactttggctgat 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggattgaattctagacatcaagtcccagccatggatgatgacacacatactttggctgat 301
Query: 1384 actgcttctttgcttcttggtatgaatgacgctagatctgacaaagcaagtaggccaaga 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 actgcttctttgcttcttggtatgaatgacgctagatctgacaaagcaagtaggccaaga 361
Query: 1444 tcaggtagccctttctcatttcctcgccaaaaacgctctgttagaccccgcctgtaccta 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaggtagccctttctcatttcctcgccaaaaacgctctgttagaccccgcctgtaccta 421
Query: 1504 tcaattgattcagattcggagtaa 1527
||||||||||||||||||||||||
Sbjct: 422 tcaattgattcagattcggagtaa 445
>gnl|LJGI|BP067244 similar to UniRef100_Q2HSV7 Cluster: DNA-binding SAP; Zinc finger,
MIZ-type; Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: DNA-binding SAP; Zinc finger, MIZ-type;
Zinc finger, FYVE/PHD-type - Medicago truncatula (Barrel
medic), partial (9%)
Length = 461
Score = 474 bits (239), Expect = e-133
Identities = 297/317 (93%)
Strand = Plus / Minus
Query: 1071 tgacttaaatggtggcttggttgacaacccattggcatttgctggagatgatccatcgct 1130
||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||
Sbjct: 461 tgacttaaatggtggcttggttgaccaccccttggcctttgctggagatgatccctcgct 402
Query: 1131 tcagatttttctccccacaagaccagctgagtcatcagtgcagaatgaattaagagatcg 1190
|||||||||||||||| | ||||| ||||||||||| || | ||||||||||||||||||
Sbjct: 401 tcagatttttctcccccccagacccgctgagtcatccgtnccgaatgaattaagagatcg 342
Query: 1191 ggcagatgtgtccaatggtgtctgcactgaggattggatatctcttagtcttggaggtgg 1250
| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gnccgatgtgtcccatggtgtctgcactgaggattggatatctcttagtcttggaggtgg 282
Query: 1251 tgctgctggcagtaatggcaatgcttccgctcaaaatggattgaattctagaggcaatgc 1310
||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||
Sbjct: 281 tgctgctggcagtaatggccatgcttccgctccaaatggattgaattctagaggccatgc 222
Query: 1311 ttccattcaaaatggattgaattctagacatcaagtcccagccatggatgatgacacaca 1370
|||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 221 ttccattccaaatggattgaattctagacatccagtccccgccctggatgatgacacaca 162
Query: 1371 tactttggctgatactg 1387
|||||||||||||||||
Sbjct: 161 tactttggctgatactg 145
>gnl|LJGI|TC71155 similar to UniRef100_A7NZG1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 662
Score = 335 bits (169), Expect = 5e-91
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 1356 ggatgatgacacacatactttggctgatactgcttctttgcttcttggtatgaatgacgc 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgatgacacacatactttggctgatactgcttctttgcttcttggtatgaatgacgc 60
Query: 1416 tagatctgacaaagcaagtaggccaagatcaggtagccctttctcatttcctcgccaaaa 1475
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagatctgacnaagcaagtaggccaagatcaggtagccctttctcatttcctcgccaaaa 120
Query: 1476 acgctctgttagaccccgcctgtacctatcaattgattcagattcggagtaa 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgctctgttagaccccgcctgtacctatcaattgattcagattcggagtaa 172