Miyakogusa Predicted Gene

Lj0g3v0359099.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0359099.1 tr|G7I8M9|G7I8M9_MEDTR PsbP-like protein
OS=Medicago truncatula GN=MTR_1g083120 PE=4 SV=1,84.2,0,A domain
family that is part of the cupin me,JmjC domain; JmjC,JmjC domain;
coiled-coil,NULL; Clavam,CUFF.24708.1
         (1833 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67306 similar to UniRef100_A7PS36 Cluster: Chromosome...  1503   0.0  

>gnl|LJGI|TC67306 similar to UniRef100_A7PS36 Cluster: Chromosome chr14 scaffold_27,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_27, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (16%)
          Length = 1561

 Score = 1503 bits (758), Expect = 0.0
 Identities = 806/822 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1012 ctgaaggactggcagagaactaaaattgaaatgatgaaaaaagcttacaaggaacctgag 1071
            |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 12   ctgaaggactggcagagaactaaaattgaacttatgaaaaaagcttacaaggaacctgag 71

                                                                        
Query: 1072 gcaaaagaatcttgtggggatccacagatatgttcgccttcaccactgagtacagaaaat 1131
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 72   gcaaaagaatcttgtggggatccacagatatgttcgccttcaccactcagtacagaaaat 131

                                                                        
Query: 1132 aatggactggatttggaatcaaaccagattaattcaattatggatcaagagtctgaaaac 1191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132  aatggactggatttggaatcaaaccagattaattcaattatggatcaagagtctgaaaac 191

                                                                        
Query: 1192 cattctagtgctgaagggactatggttaattctgaacttccaattagacaaaatggagag 1251
            |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 192  cattctagtgctgaagagactatggtcaattctgaacttccatttagacaaaatggagag 251

                                                                        
Query: 1252 gtctctgacaatactcatcctggagttctttgggatatctttcgtcggcaggatgttccc 1311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 252  gtctctgacaatactcatcctggagttctttgggatatctttcgtcggcaggatgttcca 311

                                                                        
Query: 1312 aaggtgactgaatatttgaaaatgcattggaaggaatttgggaagtcagatgacacagga 1371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312  aaggtgactgaatatttgaaaatgcattggaaggaatttgggaagtcagatgacacagga 371

                                                                        
Query: 1372 aatgaatttgttacatggcctctttatgatggagcaatttttctcgatcgacatcataaa 1431
            |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 372  aatgaatttgttacatggcctctttatgatggagcaatttttctcgacagacatcataaa 431

                                                                        
Query: 1432 acaaagttgaaggaagaatttggagttgagccatggtcatttgaacaaaatttgggggag 1491
            ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 432  acaaatttgagggaagaatttggagttgagccatggtcatttgaacaaagtttgggggag 491

                                                                        
Query: 1492 gctatatttgttcctgctggttgtcctttccaagcaaggaatgttcagtcaacagttcag 1551
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 492  gctatatttgttcctgctggttgtcctttccaagcgaggaatgttcagtcaacagttcag 551

                                                                        
Query: 1552 ttgggccttgatttcttatctccggaaagcctaggggaggctgtaagattggctgaggaa 1611
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 552  ttgggccttgatttcttatctccggaaagcctgggggaggctgtaagattggctgaggaa 611

                                                                        
Query: 1612 gttcggtgtctacctaatgaacatgaagcaaagcttcaagttttggaggtcgggaagata 1671
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 612  gttcggtgtctacctaatgaacatgaagctaagcttcaagttttggaggtcgggaagata 671

                                                                        
Query: 1672 tctctttatgcagcaagttctgccatcaaagaagttcaaaaacttgtacttgacccaaaa 1731
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 672  tctctttatgcagcaagttctgccatcaaagaagttcagaaacttgtacttgacccaaaa 731

                                                                        
Query: 1732 cttggctcagagattggatatggagaccctaatttgactgcaatggtttcggagaattat 1791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732  cttggctcagagattggatatggagaccctaatttgactgcaatggtttcggagaattat 791

                                                      
Query: 1792 gagaagatggttaagcggcggcagattgcttgtgcctgaact 1833
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  gagaagatggttaagcggcggcagattgcttgtgcctgaact 833