Miyakogusa Predicted Gene
- Lj0g3v0358459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0358459.1 tr|B9HBR7|B9HBR7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561442 PE=4 SV=1,54.05,2e-19,
,CUFF.24659.1
(330 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome... 654 0.0
gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome... 236 7e-62
gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosom... 86 2e-16
>gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 766
Score = 654 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus
Query: 1 atgtcgaggcctatgctgcttgtcttcttgctgattatacttataatcacctcacagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgtcgaggcctatgctgcttgtcttcttgctgattatacttataatcacctcacagttt 382
Query: 61 gagtggaaacaaccgcttgtggccgatgtcgattccaatccaaatgtttcccaaaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gagtggaaacaaccgcttgtggccgatgtcgattccaatccaaatgtttcccaaaagcag 442
Query: 121 cgtcagatttccaagcccgaagaaactgtaaaggagaagattattttagtgcaagagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cgtcagatttccaagcccgaagaaactgtaaaggagaagattattttagtgcaagagaag 502
Query: 181 aatattcgaagactgaatgagctcgtgcggcatctccaggaacaactgcagcagtgtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatattcgaagactgaatgagctcgtgcggcatctccaggaacaactgcagcagtgtaga 562
Query: 241 ggaagcaatggaactacaaacggcacttcaagctctttaactgagcggattcttgagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggaagcaatggaactacaaacggcacttcaagctctttaactgagcggattcttgagctt 622
Query: 301 gagcgacaacaaatattagaggattgagcc 330
||||||||||||||||||||||||||||||
Sbjct: 623 gagcgacaacaaatattagaggattgagcc 652
>gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 733
Score = 236 bits (119), Expect = 7e-62
Identities = 149/159 (93%)
Strand = Plus / Plus
Query: 1 atgtcgaggcctatgctgcttgtcttcttgctgattatacttataatcacctcacagttt 60
||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 453 atgtcgaggtccatgctgcttgtcttcttactgattatacttataatcacctcacagttt 512
Query: 61 gagtggaaacaaccgcttgtggccgatgtcgattccaatccaaatgtttcccaaaagcag 120
||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||
Sbjct: 513 gagtggaaacaaccgcttgtggccgatgttgattccaatcccaatgtatctcaaaagcag 572
Query: 121 cgtcagatttccaagcccgaagaaactgtaaaggagaag 159
| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 573 catcagatttccaagcctgaagaaactgtgaaggagaag 611
>gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 549
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 atgtcgaggcctatgctgcttgtcttcttgctgattatacttataat 47
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 371 atgtcgaggcccatgctgcttgtcttcttgctgattatacttataat 417