Miyakogusa Predicted Gene
- Lj0g3v0358409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0358409.1 tr|G7I885|G7I885_MEDTR Aspartyl-tRNA synthetase
OS=Medicago truncatula GN=MTR_1g014140 PE=3
SV=1,79.47,0,AA_TRNA_LIGASE_II,Aminoacyl-tRNA synthetase, class II;
tRNA-synt_2,Aminoacyl-tRNA synthetase, class ,gene.g28167.t1.1
(1248 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62839 similar to UniRef100_A7P536 Cluster: Chromosome... 1764 0.0
gnl|LJGI|TC62187 similar to UniRef100_A7P536 Cluster: Chromosome... 357 1e-97
gnl|LJGI|BP075351 similar to UniRef100_A7P536 Cluster: Chromosom... 184 9e-46
>gnl|LJGI|TC62839 similar to UniRef100_A7P536 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (88%)
Length = 2018
Score = 1764 bits (890), Expect = 0.0
Identities = 893/894 (99%)
Strand = Plus / Plus
Query: 355 gcatttagacaatttttgttgaaagaaaactttgttgaaatccacactccaaagttgatt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gcatttagacaatttttgttgaaagaaaactttgttgaaatccacactccaaagttgatt 861
Query: 415 gctggatctagtgagggtggagctgctgtttttagactggactacaaagggcaacctgca 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gctggatctagtgagggtggagctgctgtttttagactggactacaaagggcaacctgca 921
Query: 475 tgcttggcccaatcacctcaacttcataagcaaatgtcaatatgtggtgactttggccgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tgcttggcccaatcacctcaacttcataagcaaatgtcaatatgtggtgactttggccgt 981
Query: 535 gtttttgagattggccctgtgtttagagcagaggattcttttactcacagacatctgtgt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gtttttgagattggccctgtgtttagagcagaggattcttttactcacagacatctgtgt 1041
Query: 595 gagtttacaggtcttgatgttgaaatggagattaagaagcattactttgaggttatggat 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gagtttacaggtcttgatgttgaaatggagattaagaagcattactttgaggttatggat 1101
Query: 655 gttgttgataaattgtttgtcgcgatgtttgacagtttgaaccagaattgtaagaaggat 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gttgttgataaattgtttgtcgcgatgtttgacagtttgaaccagaattgtaagaaggat 1161
Query: 715 ctggaagctgtgggatgtcagtatccatttgaacctctgaagtatctgcgaaatactctg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 ctggaagctgtgggatgtcagtatccatttgaacctctgaagtatctgcgaaatactctg 1221
Query: 775 cgtcttacttatgaagaagggattcaaatgctcaaggaggctggagtagaaattgaacct 834
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 cgccttacttatgaagaagggattcaaatgctcaaggaggctggagtagaaattgaacct 1281
Query: 835 tttggtgacttgaatactgaagcagaaaggaaactaggcaaactagttctagagaagtac 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 tttggtgacttgaatactgaagcagaaaggaaactaggcaaactagttctagagaagtac 1341
Query: 895 ggcacggagttctatatccttcatcggtaccctttggctgtaagaccattctatacaatg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ggcacggagttctatatccttcatcggtaccctttggctgtaagaccattctatacaatg 1401
Query: 955 ccctgctatgacaatccagcttacaccaactcatttgatgtctttattagaggtgaggag 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 ccctgctatgacaatccagcttacaccaactcatttgatgtctttattagaggtgaggag 1461
Query: 1015 ataatttcaggagctcaacgtatccacgtgccagattttttggaagaacgtgcagcggct 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 ataatttcaggagctcaacgtatccacgtgccagattttttggaagaacgtgcagcggct 1521
Query: 1075 tgtggcattgaagtcagtacaatatcgacatatatcgattctttcagatatggtgcacca 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 tgtggcattgaagtcagtacaatatcgacatatatcgattctttcagatatggtgcacca 1581
Query: 1135 ccgcatggtggctttggagtaggtttggagcgtgtcgtaatgctcttctgcggcctagat 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 ccgcatggtggctttggagtaggtttggagcgtgtcgtaatgctcttctgcggcctagat 1641
Query: 1195 aacattaggaagacatcactttatccacgtgacccgaaaaggattgcgccgtga 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 aacattaggaagacatcactttatccacgtgacccgaaaaggattgcgccgtga 1695
Score = 357 bits (180), Expect = 1e-97
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 atggcgtttttggttgtgagggagaatggcttcactgtgcagtgcttggtgcaggcgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atggcgtttttggttgtgagggagaatggcttcactgtgcagtgcttggtgcaggcgcag 456
Query: 61 ccagatgtggtgagtccgcagatggtgaaattcgccgccgcgctgaaccgcgagtcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ccagatgtggtgagtccgcagatggtgaaattcgccgccgcgctgaaccgcgagtcgatc 516
Query: 121 attgacgtcgtgggtgttgtttctgtcccagccgctcccatcaaaggcgccacgcagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 attgacgtcgtgggtgttgtttctgtcccagccgctcccatcaaaggcgccacgcagcag 576
Score = 224 bits (113), Expect = 1e-57
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 244 gtggaaattcaagtgaggaaattgtactgtgtgggtagggctgtcccgactctaccgatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtggaaattcaagtgaggaaattgtactgtgtgggtagggctgtcccgactctaccgatt 636
Query: 304 aatctggaggatgctgctcggagcgatgttgaagttgagaaggctcttcaggc 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aatctggaggatgctgctcggagcgatgttgaagttgagaaggctcttcaggc 689
>gnl|LJGI|TC62187 similar to UniRef100_A7P536 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 753
Score = 357 bits (180), Expect = 1e-97
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 atggcgtttttggttgtgagggagaatggcttcactgtgcagtgcttggtgcaggcgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atggcgtttttggttgtgagggagaatggcttcactgtgcagtgcttggtgcaggcgcag 496
Query: 61 ccagatgtggtgagtccgcagatggtgaaattcgccgccgcgctgaaccgcgagtcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccagatgtggtgagtccgcagatggtgaaattcgccgccgcgctgaaccgcgagtcgatc 556
Query: 121 attgacgtcgtgggtgttgtttctgtcccagccgctcccatcaaaggcgccacgcagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attgacgtcgtgggtgttgtttctgtcccagccgctcccatcaaaggcgccacgcagcag 616
Score = 224 bits (113), Expect = 1e-57
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 244 gtggaaattcaagtgaggaaattgtactgtgtgggtagggctgtcccgactctaccgatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtggaaattcaagtgaggaaattgtactgtgtgggtagggctgtcccgactctaccgatt 676
Query: 304 aatctggaggatgctgctcggagcgatgttgaagttgagaaggctcttcaggc 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aatctggaggatgctgctcggagcgatgttgaagttgagaaggctcttcaggc 729
>gnl|LJGI|BP075351 similar to UniRef100_A7P536 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (5%)
Length = 379
Score = 184 bits (93), Expect = 9e-46
Identities = 126/133 (94%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 1119 cagatatggtgcaccaccgcatgg-tggctttggagtaggtttggagcgtgtcgtaatgc 1177
||||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 267 cagatatggtgcacccccccctggctggctttggagtaggtttggagcgtgtcgtaatgc 208
Query: 1178 tcttctgcggcctagataacattaggaagacatcacttta-tccacgtga-cccgaaaag 1235
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 207 tcttctgcggcctagattacattaggaagacatcactttactccacgtgaccccgaaaag 148
Query: 1236 gattgcgccgtga 1248
|||||||||||||
Sbjct: 147 gattgcgccgtga 135