Miyakogusa Predicted Gene
- Lj0g3v0357619.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0357619.1 Non Chatacterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847
PE,59.26,0.000000000001,zf-4CXXC_R1,Zinc-finger domain of
monoamine-oxidase A repressor R1,CUFF.24609.1
(279 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chr... 349 6e-96
gnl|LJGI|TC76565 weakly similar to UniRef100_A7PGP7 Cluster: Chr... 291 1e-78
gnl|LJGI|TC68161 weakly similar to UniRef100_A7PGP7 Cluster: Chr... 264 3e-70
gnl|LJGI|FS334779 weakly similar to UniRef100_A7PGP7 Cluster: Ch... 174 2e-43
gnl|LJGI|FS323623 weakly similar to UniRef100_A7PAL1 Cluster: Ch... 149 1e-35
gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Ch... 109 9e-24
gnl|LJGI|BW597581 similar to UniRef100_Q0G032 Cluster: Probable ... 50 7e-06
>gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 492
Score = 349 bits (176), Expect = 6e-96
Identities = 247/271 (91%), Gaps = 11/271 (4%)
Strand = Plus / Plus
Query: 20 accaatgttttgttcataccggcgagtgccggcgaaaaatccagggcgtcgctccttcg- 78
||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct: 143 accaacgttttgttcttatcggcgagtgccggcgaaaaatccagggcgtcgctgcttcgt 202
Query: 79 -----aatctgagaaatggcaagccttgtgaaatcagattttgccgtttatgcctttcaa 133
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 203 gcaagaatctgagaaatggcaagccttgtgtaataagattttgccgtttatgcctttcaa 262
Query: 134 tcagatatggggaggaagcaccacaggtagttctgttggatgactggagttgcccaaagt 193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acagatatggggaggaagcaccacaggtagttctgttggatgactggagttgcccaaagt 322
Query: 194 gccggggcaaatgcaactgtagcacatgcaggataaac-----gtaagaagcctagcaga 248
|||||||||||||| ||||||||||||||| |||||| |||||||||||||||||
Sbjct: 323 gccggggcaaatgctactgtagcacatgcatgataaaaaaaaggtaagaagcctagcaga 382
Query: 249 ggatgaggacccttgtcctggatgctattga 279
||||||||||| ||||| ||||||||||||
Sbjct: 383 ggatgaggacctttgtctaggatgctattga 413
>gnl|LJGI|TC76565 weakly similar to UniRef100_A7PGP7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 640
Score = 291 bits (147), Expect = 1e-78
Identities = 242/274 (88%), Gaps = 11/274 (4%)
Strand = Plus / Plus
Query: 17 tctaccaatgttttgttcataccggcgagtgccggcgaaaaatccagggcgtcgctcctt 76
||||| |||||||||||||| |||||||||||| | |||||||| | || |||||| |||
Sbjct: 140 tctactaatgttttgttcattccggcgagtgccagagaaaaatcaatggtgtcgctgctt 199
Query: 77 cg------aatctgagaaatggcaagccttgtgaaatcagattttgccgtttatgccttt 130
| ||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 200 tgtgcaagaatctgataaatggcaagccttgtgtaatcagattttgccatttatgccttt 259
Query: 131 caatcagatatggggaggaagcaccacaggtagttctgttggatgactggagttgcccaa 190
|| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 260 taaacagatatggggaggaagcacaacaggtagttctgctggatgactggagttgcccaa 319
Query: 191 agtgccggggcaaatgcaactgtagcacatgcaggataaac-----gtaagaagcctagc 245
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 320 agtgccggggcaaatgcaactgtagcacatgcatgataaaaaaaaggtaagaagcctagc 379
Query: 246 agaggatgaggacccttgtcctggatgctattga 279
|||||||||||||| ||||| ||||||||||||
Sbjct: 380 agaggatgaggacctttgtctaggatgctattga 413
>gnl|LJGI|TC68161 weakly similar to UniRef100_A7PGP7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 808
Score = 264 bits (133), Expect = 3e-70
Identities = 189/208 (90%), Gaps = 6/208 (2%)
Strand = Plus / Plus
Query: 78 gaatctgagaaatggcaagccttgtgaaatcagattttgccgtttatgcctttcaatcag 137
|||| ||| ||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 375 gaatttgataaatggcaagccttgtgtaatcagattttgccatttatgccttttaaacag 434
Query: 138 atatggggaggaagcaccacaggtagttctgttggatgactggagttgcccaaagtgccg 197
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 435 atatggggaggaagcacaacaggtagttctgctggatgactggagttgcccaaagtgccg 494
Query: 198 gggcaaatgcaactgtagcacatgcaggat------aaacgtaagaagcctagcagagga 251
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 495 gggcaaatgcaactgtagcacatgcatgataaaaaaaaaggtaagaagcctagcagagga 554
Query: 252 tgaggacccttgtcctggatgctattga 279
|||||||| ||||| ||||||||||||
Sbjct: 555 tgaggacctttgtctaggatgctattga 582
>gnl|LJGI|FS334779 weakly similar to UniRef100_A7PGP7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 777
Score = 174 bits (88), Expect = 2e-43
Identities = 189/223 (84%), Gaps = 6/223 (2%)
Strand = Plus / Plus
Query: 10 aactgtttctaccaatgttttgttcataccggcgagtgccggcgaaaaatccagggcgtc 69
|||||| ||||||||| |||||||||||| |||||||||||| | ||||| |||| |||
Sbjct: 183 aactgtctctaccaattgtttgttcatacctgcgagtgccggcaagaaatcaagggtgtc 242
Query: 70 gctccttcg------aatctgagaaatggcaagccttgtgaaatcagattttgccgttta 123
||| ||| | ||||||| ||||||||| ||||||| | ||||||| |||||| ||
Sbjct: 243 gctgctttgtgcaagaatctgaaaaatggcaatccttgtgtactcagattgtgccgtgta 302
Query: 124 tgcctttcaatcagatatggggaggaagcaccacaggtagttctgttggatgactggagt 183
||||||| || ||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 303 tgccttttaaacagatatggggaggaagcagaacaggtcaataggttggatgactggagg 362
Query: 184 tgcccaaagtgccggggcaaatgcaactgtagcacatgcagga 226
||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 363 tgcccaaagtgccggggcaaatgcaactgtagcgcttgcagga 405
>gnl|LJGI|FS323623 weakly similar to UniRef100_A7PAL1 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 725
Score = 149 bits (75), Expect = 1e-35
Identities = 185/222 (83%), Gaps = 6/222 (2%)
Strand = Plus / Plus
Query: 1 atggaagaaaactgtttctaccaatgttttgttcataccggcgagtgccggcgaaaaatc 60
|||||||| |||| | || ||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 123 atggaagagaactatctccaccgatgttttgttcattccggcgagtgccggcgaaaaatc 182
Query: 61 cagggcgtcgctccttc------gaatctgagaaatggcaagccttgtgaaatcagattt 114
|||| |||||| ||| ||| |||| ||| ||||| ||||||| | ||| |||
Sbjct: 183 aagggtgtcgctgctttctgcaagaacctgaaaaagggcaaaccttgtgtactcaaattg 242
Query: 115 tgccgtttatgcctttcaatcagatatggggaggaagcaccacaggtagttctgttggat 174
|||||| ||||||||| || |||||| |||||||||||| |||||| | |||||||
Sbjct: 243 tgccgtgtatgccttttaaacagatacggggaggaagcagaacaggtcaataggttggat 302
Query: 175 gactggagttgcccaaagtgccggggcaaatgcaactgtagc 216
|||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 303 gactggagttgccctaagtgccggggcatatgcaactgtagc 344
>gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 714
Score = 109 bits (55), Expect = 9e-24
Identities = 115/135 (85%)
Strand = Plus / Plus
Query: 82 ctgagaaatggcaagccttgtgaaatcagattttgccgtttatgcctttcaatcagatat 141
|||| ||| ||||| ||||||| | ||| ||| |||||| ||||||||| || ||||||
Sbjct: 279 ctgaaaaagggcaaaccttgtgtactcaaattgtgccgtgtatgccttttaaacagatac 338
Query: 142 ggggaggaagcaccacaggtagttctgttggatgactggagttgcccaaagtgccggggc 201
|||||||||||| |||||| | ||||||||||||||||||||| ||||||||||||
Sbjct: 339 ggggaggaagcagaacaggtcaataggttggatgactggagttgccctaagtgccggggc 398
Query: 202 aaatgcaactgtagc 216
| |||||||||||||
Sbjct: 399 atatgcaactgtagc 413
>gnl|LJGI|BW597581 similar to UniRef100_Q0G032 Cluster: Probable peptide methionine
sulfoxide reductase protein; n=1; Fulvimarina pelagi
HTCC2506|Rep: Probable peptide methionine sulfoxide
reductase protein - Fulvimarina pelagi HTCC2506, partial
(6%)
Length = 481
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 170 tggatgactggagttgcccaaagtgccggggcaaatgcaactgta 214
|||||||||||| |||||| | ||||||||||| |||| ||||||
Sbjct: 48 tggatgactggatttgccctatgtgccggggcatatgcgactgta 92