Miyakogusa Predicted Gene
- Lj0g3v0357259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0357259.1 tr|G7IJK6|G7IJK6_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_2g082800 PE=4 SV=1,33.73,3e-16,FBD,FBD;
domain in FBox and BRCT domain containing pl,FBD,gene.g28070.t1.1
(789 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chr... 153 2e-36
>gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 1713
Score = 153 bits (77), Expect = 2e-36
Identities = 139/157 (88%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 530 ctgaccaagaactgttgaattatgatccggtgcctgaatgtttgctaactactcttcaag 589
|||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1280 ctgaccaagaactgttgaattatggccctgtgcctgaatgtttttcaactactcttcaag 1339
Query: 590 tggtgaagtttgaggaatttaaa-ggttctgagcatcagttaaattttgctaaatttgtg 648
|||| |||||| |||| ||| | ||||||||||||||||||| ||||||||||||||||
Sbjct: 1340 tggtaaagttt-aggagttttgatggttctgagcatcagttaagttttgctaaatttgtg 1398
Query: 649 atgggaaatgctcttgccttgaagaagatgaggttca 685
|||| ||||| | |||||||||||| |||||| ||||
Sbjct: 1399 atggaaaatgttgttgccttgaagaggatgagtttca 1435
Score = 127 bits (64), Expect = 1e-28
Identities = 184/224 (82%)
Strand = Plus / Plus
Query: 284 catatcctaccataaagttttgtgcttcccgtcttatagaattcgcttatgatgattatc 343
|||||||||||||||||||| ||||||| ||||||| ||||||| |||| || || ||
Sbjct: 899 catatcctaccataaagtttcgtgcttcacgtcttaaagaattcagttatattggttctc 958
Query: 344 cattaccggaccccattgtgtttgatctatctgaagcacatattgttgatgctgatattc 403
||||||| ||||||| ||||||||||||||||| |||| || ||| | ||||||||||
Sbjct: 959 cattaccagaccccactgtgtttgatctatctgcagcaaatgttgcttctgctgatattt 1018
Query: 404 atattggttggacgaaggacgaacaagagcaagaaattatggttctttctagcaagattt 463
| |||||| | ||||| ||| | ||||||| || ||| ||||||| | |||||
Sbjct: 1019 gttttggtttgtataaggaagaaaatttgcaagaagttgtggctctttctgtcgagattc 1078
Query: 464 tgaagcaatttaaaactgtggaatgtttgaagtttcagaagtgg 507
||||| ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 1079 tgaagaaatttcaaaatgtggaatgtttgaagttccagaagtgg 1122
Score = 103 bits (52), Expect = 2e-21
Identities = 109/128 (85%)
Strand = Plus / Plus
Query: 137 ataactctggaaatattcaccttatttttccacttctgagaaactataagacagaagatt 196
|||| |||||||| ||||||||| ||| ||| ||||||||| |||||||||| || ||
Sbjct: 737 ataaatctggaaaggttcaccttaatttcccagttctgagaacctataagacaaaaagtt 796
Query: 197 gcacctggtcatcaagtctaaagtatgtcactttagaagcacctctgcttgaagtagttt 256
|||| |||| |||||| | |||| |||||||||||||| |||||||||| |||||||||
Sbjct: 797 gcacttggttgtcaagtgtgaagtgtgtcactttagaagtacctctgcttcaagtagttt 856
Query: 257 caatacag 264
| ||||||
Sbjct: 857 ctatacag 864