Miyakogusa Predicted Gene

Lj0g3v0356789.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0356789.1 tr|A9RSH0|A9RSH0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_109595,34.18,9e-19,FAM175PLANT,FAM175 family, plant;
seg,NULL,CUFF.24569.1
         (622 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV410227 similar to UniRef100_A7QFF2 Cluster: Chromosom...   379   e-104
gnl|LJGI|AU251527 similar to UniRef100_A7QFF2 Cluster: Chromosom...   264   6e-70

>gnl|LJGI|AV410227 similar to UniRef100_A7QFF2 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 414

 Score =  379 bits (191), Expect = e-104
 Identities = 191/191 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgatccaccgttgcagaacatcgcaatttccgggcccacactagcctccctcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  atggacgatccaccgttgcagaacatcgcaatttccgggcccacactagcctccctcatc 117

                                                                       
Query: 61  caacgcttctccaccgcgccctccgccatcgacggcctcctcttcggccacgtcacccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 caacgcttctccaccgcgccctccgccatcgacggcctcctcttcggccacgtcacccac 177

                                                                       
Query: 121 gtcacccctctcaacctctccgacgactccgacaccgactcctccaccctcctcgccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gtcacccctctcaacctctccgacgactccgacaccgactcctccaccctcctcgccacc 237

                      
Query: 181 gtcaccggctt 191
           |||||||||||
Sbjct: 238 gtcaccggctt 248



 Score =  123 bits (62), Expect = 1e-27
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                       
Query: 266 gccgtagaacccctctccgcccctccatgcgcgaattctccatcacctcctcgctttcct 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gccgtagaacccctctccgcccctccatgcgcgaattctccatcacctcctcgctttcct 412

             
Query: 326 cc 327
           ||
Sbjct: 413 cc 414


>gnl|LJGI|AU251527 similar to UniRef100_A7QFF2 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 390

 Score =  264 bits (133), Expect = 6e-70
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                       
Query: 450 ccgcgcctaccagttccgccgcgccgccctctctttcgacgccaaatccatcaacattgt 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgcgcctaccagttccgccgcgccgccctctctttcgacgccaaatccatcaacattgt 60

                                                                       
Query: 510 taacattggaccggcttttcgcggccattacggctcattcagccctaactctccgttacc 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taacattggaccggcttttcgcggccattacggctcattcagccctaactctccgttacc 120

                        
Query: 570 ggccctgaattgc 582
           |||||||||||||
Sbjct: 121 ggccctgaattgc 133