Miyakogusa Predicted Gene
- Lj0g3v0356229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0356229.1 Non Chatacterized Hit- tr|C5XFJ9|C5XFJ9_SORBI
Putative uncharacterized protein Sb03g043330
OS=Sorghu,28.35,7e-19,seg,NULL; LEA_2,Late embryogenesis abundant
protein, LEA-14,CUFF.24522.1
(744 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS327773 weakly similar to UniRef100_A7QQD5 Cluster: Ch... 1328 0.0
gnl|LJGI|TC76120 weakly similar to UniRef100_A7QQD5 Cluster: Chr... 206 1e-52
gnl|LJGI|BP057466 weakly similar to UniRef100_A7QQD5 Cluster: Ch... 64 1e-09
>gnl|LJGI|FS327773 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (76%)
Length = 806
Score = 1328 bits (670), Expect = 0.0
Identities = 670/670 (100%)
Strand = Plus / Plus
Query: 1 atgcttgctctcccacccccaccttcactctcatccccagcgacaaaccaaaccaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgcttgctctcccacccccaccttcactctcatccccagcgacaaaccaaaccaaacca 196
Query: 61 ctctctctagaccaaattgtcatatcaaaacaacccacaaaccatctttctctggaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctctctctagaccaaattgtcatatcaaaacaacccacaaaccatctttctctggaacca 256
Query: 121 aattcatcaaattcagctaaaacaaagttaagcaggccaccagcactaaggtttcaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aattcatcaaattcagctaaaacaaagttaagcaggccaccagcactaaggtttcaaagg 316
Query: 181 accaatccaatcatatggtttgcttcagttttgtgcctcatattcagccttgtactcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 accaatccaatcatatggtttgcttcagttttgtgcctcatattcagccttgtactcatc 376
Query: 241 ttctttggtgttgcaactttgaccatcttcctaggaatcaaaccaagaaaccccacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttctttggtgttgcaactttgaccatcttcctaggaatcaaaccaagaaaccccacattt 436
Query: 301 gacatccccaatgcaaacctcaatgctttgtattttgactccccacaatacttcaatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gacatccccaatgcaaacctcaatgctttgtattttgactccccacaatacttcaatggt 496
Query: 361 gacttcaccctccttgccaatttcaccaaccccaacaccaaaattgatgtgagctttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gacttcaccctccttgccaatttcaccaaccccaacaccaaaattgatgtgagctttgag 556
Query: 421 tctttggatattgagcttttcttctcagacaggatcatatcatcgcagtcgatcgagccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctttggatattgagcttttcttctcagacaggatcatatcatcgcagtcgatcgagccg 616
Query: 481 tttactcagaggagaagggaaagcaggttgcaatcactgcacttcatatcaagtttggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttactcagaggagaagggaaagcaggttgcaatcactgcacttcatatcaagtttggtg 676
Query: 541 tttttgcctaaggatcttggtgtgatgcttgaaaagcaggtgcagagtaacttggtcaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttttgcctaaggatcttggtgtgatgcttgaaaagcaggtgcagagtaacttggtcaat 736
Query: 601 tacaatgtaagaggaacatttaaagtgagagtcactttggggctcattcatttgtcttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tacaatgtaagaggaacatttaaagtgagagtcactttggggctcattcatttgtcttac 796
Query: 661 ctgctgcata 670
||||||||||
Sbjct: 797 ctgctgcata 806
>gnl|LJGI|TC76120 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 493
Score = 206 bits (104), Expect = 1e-52
Identities = 251/300 (83%)
Strand = Plus / Plus
Query: 193 atatggtttgcttcagttttgtgcctcatattcagccttgtactcatcttctttggtgtt 252
|||||||||||| ||||| ||||| | ||||||||||||||||| ||||||||||| ||
Sbjct: 187 atatggtttgctgcagttctgtgcttgatattcagccttgtacttatcttctttggaatt 246
Query: 253 gcaactttgaccatcttcctaggaatcaaaccaagaaaccccacatttgacatccccaat 312
||||| || | ||||| ||| |||| ||||||||||||| ||||||||| ||||||
Sbjct: 247 gcaacattaatcatctacctttccttcaagccaagaaaccccatatttgacattcccaat 306
Query: 313 gcaaacctcaatgctttgtattttgactccccacaatacttcaatggtgacttcaccctc 372
|||| |||||||| | | ||||||||||| || ||| |||||||||| ||| || ||
Sbjct: 307 gcaagcctcaatgttgtttattttgactcaacaagttacctcaatggtgaattcgccttc 366
Query: 373 cttgccaatttcaccaaccccaacaccaaaattgatgtgagctttgagtctttggatatt 432
||||| |||||||| |||||||||| | |||| ||||||| |||||||| ||| | |||
Sbjct: 367 cttgcaaatttcactaaccccaacagtagaattcatgtgaggtttgagtccttgaagatt 426
Query: 433 gagcttttcttctcagacaggatcatatcatcgcagtcgatcgagccgtttactcagagg 492
||||||||||||||||||||| |||| ||||| || || ||| |||| ||||||||||||
Sbjct: 427 gagcttttcttctcagacaggctcatctcatcacaatcaatcaagccttttactcagagg 486
>gnl|LJGI|BP057466 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 337
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 675 atgccagatagagatgactagtcctccaactggtggtttagtagctag 722
|||||||| |||||||||||||||||||||||||| | || |||||||
Sbjct: 224 atgccagaaagagatgactagtcctccaactggtgttctattagctag 177