Miyakogusa Predicted Gene

Lj0g3v0355169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0355169.1 Non Chatacterized Hit- tr|B9RLT3|B9RLT3_RICCO DNA
binding protein, putative OS=Ricinus communis
GN=R,58.02,2e-16,seg,NULL,CUFF.24464.1
         (453 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76882 similar to UniRef100_A7PDF3 Cluster: Chromosome...   484   e-136

>gnl|LJGI|TC76882 similar to UniRef100_A7PDF3 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 588

 Score =  484 bits (244), Expect = e-136
 Identities = 259/264 (98%)
 Strand = Plus / Plus

                                                                       
Query: 190 aacaccatgaatcgggctaacatgcccggcatgcctccagtcctccacccttctgccttc 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aacaccatgaatcgggctaacatgcccggcatgcctccagtcctccacccttctgccttc 184

                                                                       
Query: 250 atgcccatggcctcatgggatgctgcgacagccgcaaccggcggtgaccggcttcaagga 309
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 185 atgcccatggcctcatgggatgcttcgacagccgcaaccggcggtgaccggcttcaagga 244

                                                                       
Query: 310 cctccagccaccatgatgcctgaccctatgtccacatttttcggatgccaatcacagccc 369
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cctccagcccccctgatgcctgaccctatgtccacatttttcggatgccaatcacagccc 304

                                                                       
Query: 370 atgaacatggaagcctatagtaggcttgctgcgatgtatcaacagctgcaccagcctcca 429
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atgcacatggaagcctatagtaggcttgctgcgatgtatcaacagctgcaccagcctcca 364

                                   
Query: 430 gcttctggtccaaagaattgagat 453
           ||||||||||| ||||||||||||
Sbjct: 365 gcttctggtcccaagaattgagat 388



 Score =  113 bits (57), Expect = 1e-24
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                    
Query: 66  caacatgtcatccatgatgctcccgatgaccatgcaacaacaacttcaaatgtcgat 122
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caacatgtcatccatgatgctcccgatgaccatgcaacaacaacttcaaatgtcgat 57