Miyakogusa Predicted Gene

Lj0g3v0354469.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0354469.1 Non Chatacterized Hit- tr|I1KIB6|I1KIB6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41882 PE,72.65,0,no
description,Galactose oxidase, beta-propeller; seg,NULL; Kelch
motif,NULL; F-box domain,F-box dom,CUFF.24408.1
         (1080 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64843 weakly similar to UniRef100_A7PZF0 Cluster: Chr...  2091   0.0  

>gnl|LJGI|TC64843 weakly similar to UniRef100_A7PZF0 Cluster: Chromosome chr15
            scaffold_40, whole genome shotgun sequence; n=2; Vitis
            vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (81%)
          Length = 1216

 Score = 2091 bits (1055), Expect = 0.0
 Identities = 1072/1080 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggagcttgtaaatgatggaacagaatcatcaaatggtgttgatgaagctgaaattact 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80   atggagcttgtaaatgatggaacagaatcatcaaatggtgttgatgaagctgaaattact 139

                                                                        
Query: 61   aattctccacttattcctggccttccagatgatatttctcttgtgtgcctggcaagagtt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140  aattctccacttattcctggccttccagatgatatttctcttgtgtgcctggcaagagtt 199

                                                                        
Query: 121  cctagaagatatcatccagtcctgaagtgtgtctcaaaaagatnnnnnnntttagtttgc 180
            |||||||||||||||||||||||||||||||||||||||||||       ||||||||||
Sbjct: 200  cctagaagatatcatccagtcctgaagtgtgtctcaaaaagatgggggggtttagtttgc 259

                                                                        
Query: 181  agtgaagagtgggtttattatcgcaaaaagcataaacttgatgaaacctggatctatgct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260  agtgaagagtgggtttattatcgcaaaaagcataaacttgatgaaacctggatctatgct 319

                                                                        
Query: 241  ttgtgcagggacacattagataaacttttatgttttgttctggatccaacctcctcaaga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320  ttgtgcagggacacattagataaacttttatgttttgttctggatccaacctcctcaaga 379

                                                                        
Query: 301  aaatgttggaagctcattcgtgggcttccacctcgcaccatgaaaagaaaaggcataggt 360
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380  aaatgttggaagctcattcgtgggcttccacctcgcactatgaaaagaaaaggcataggt 439

                                                                        
Query: 361  tttgaagctttgggaaataagcttttcttattaggtggctgtggctggtctgaaggtgtt 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440  tttgaagctttgggaaataagcttttcttattaggtggctgtggctggtctgaaggtgtt 499

                                                                        
Query: 421  attgatgaggtttactcatacaatgcttccttgaactcttgggttgaagctacttccttg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500  attgatgaggtttactcatacaatgcttccttgaactcttgggttgaagctacttccttg 559

                                                                        
Query: 481  tcaactgctaggtgcttctttgcttgtgaagttttggatgaaaaactgtatgccattggt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560  tcaactgctaggtgcttctttgcttgtgaagttttggatgaaaaactgtatgccattggt 619

                                                                        
Query: 541  ggcataggtcaaaattcaagtgattcttgggatacttttgacccttgcacaaatggttgg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620  ggcataggtcaaaattcaagtgattcttgggatacttttgacccttgcacaaatggttgg 679

                                                                        
Query: 601  acatctcgcagagatcctaatattattcctgaagttgaagattcagtagttatggatggg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680  acatctcgcagagatcctaatattattcctgaagttgaagattcagtagttatggatggg 739

                                                                        
Query: 661  aagatatacatccgatgtggcaaatatcctgtaactcctcatgtgtatcttgtgtatgaa 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740  aagatatacatccgatgtggcaaatatcctgtaactcctcatgtgtatcttgtgtatgaa 799

                                                                        
Query: 721  ccatcaagcgatacatggcagcatgcagatgctgacatggtttcaggatggagaggtcct 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  ccatcaagcgatacatggcagcatgcagatgctgacatggtttcaggatggagaggtcct 859

                                                                        
Query: 781  gcagctgttgtagagggcgtcctttttgttttggatcagcgttcgggtagtcggttaatg 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860  gcagctgttgtagagggcgtcctttttgttttggatcagcgttcgggtagtcggttaatg 919

                                                                        
Query: 841  atgtggcataaagagagacgcgagtggatacctgttggaaagttgtcaccattgcttaca 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  atgtggcataaagagagacgcgagtggatacctgttggaaagttgtcaccattgcttaca 979

                                                                        
Query: 901  agaccaccctgccagcttgctgcagttggtaaaagtatttttgttgttgggaaagggctt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  agaccaccctgccagcttgctgcagttggtaaaagtatttttgttgttgggaaagggctt 1039

                                                                        
Query: 961  agcactgtggttgttgatgttggtgatttgggggatgtgggacgggtaatgacgggttcg 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 agcactgtggttgttgatgttggtgatttgggggatgtgggacgggtaatgacgggttcg 1099

                                                                        
Query: 1021 tctatacccaaattagattctgattacgatgtaattagttgtaaatgtttggcaatctga 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tctatacccaaattagattctgattacgatgtaattagttgtaaatgtttggcaatctga 1159