Miyakogusa Predicted Gene

Lj0g3v0354119.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0354119.1 Non Chatacterized Hit- tr|I1JMW2|I1JMW2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75,0.00000006,
,CUFF.24377.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosom...    50   6e-06
gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosom...    50   6e-06

>gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_138, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 528

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 42  tcagaatttgatgattcaaagaggagttgtaggaggagactggcaggtcacaatgag 98
           |||||||||||||| || || ||||||||||||||| | ||||| || || ||||||
Sbjct: 250 tcagaatttgatgactctaaaaggagttgtaggaggcgtctggctgggcataatgag 306


>gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_138, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (71%)
          Length = 628

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 42  tcagaatttgatgattcaaagaggagttgtaggaggagactggcaggtcacaatgag 98
           |||||||||||||| || || ||||||||||||||| | ||||| || || ||||||
Sbjct: 362 tcagaatttgatgactctaaaaggagttgtaggaggcgtctggctgggcataatgag 418