Miyakogusa Predicted Gene
- Lj0g3v0354059.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0354059.3 tr|G7IW90|G7IW90_MEDTR NB-LRR type disease
resistance protein Rps1-k-2 OS=Medicago truncatula
GN=MTR,67.6,0,RNI-like,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; OS03G0848700 PROTEIN,NULL;,CUFF.24376.3
(2546 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO040264 similar to UniRef100_Q2YE87 Cluster: NBS-LRR t... 507 e-142
gnl|LJGI|TC79449 similar to UniRef100_Q2YE87 Cluster: NBS-LRR ty... 204 2e-51
gnl|LJGI|DC598254 similar to UniRef100_A2Q524 Cluster: Disease r... 151 3e-35
gnl|LJGI|BP056393 similar to UniRef100_Q2YE88 Cluster: NBS-LRR t... 145 2e-33
gnl|LJGI|DC592854 weakly similar to UniRef100_A7QRA9 Cluster: Ch... 123 6e-27
gnl|LJGI|GO026128 weakly similar to UniRef100_A7QRD2 Cluster: Ch... 119 9e-26
gnl|LJGI|GO035198 weakly similar to UniRef100_A7QRC9 Cluster: Ch... 107 3e-22
gnl|LJGI|DC593605 weakly similar to UniRef100_Q2YE88 Cluster: NB... 72 2e-11
gnl|LJGI|DC600043 similar to UniRef100_Q2YE87 Cluster: NBS-LRR t... 54 4e-06
>gnl|LJGI|GO040264 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance
protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-2 - Glycine max
(Soybean), partial (20%)
Length = 890
Score = 507 bits (256), Expect = e-142
Identities = 704/848 (83%), Gaps = 9/848 (1%)
Strand = Plus / Minus
Query: 383 taaaactcaaagagagtcttgatctcagagagattgcaaacgagaacttatcgtctagaa 442
||||||| ||||||||||||||||||||||||||||||| |||| | ||| | |||||
Sbjct: 863 taaaactaaaagagagtcttgatctcagagagattgcaatggagagttcatcatgtagaa 804
Query: 443 ctccgtcaacatctctgcaagatggatttcacatatttggaagggatggagacaagaagg 502
||| ||||||||| ||||||||| || | | | |||||||||||||||||||||
Sbjct: 803 ttccatcaacatctgtgcaagatgaatgtg---tgtatggaagggatggagacaagaaaa 747
Query: 503 ccataatgaagctactgttggatgaaagtgaggaa---gtatctgtgatccctattgtgg 559
| ||||| ||| || |||| ||||| | | | ||| |||||||| || ||||||||||
Sbjct: 746 ctataatcaagttattgttagatgataataatgaaaaagtatctgttattcctattgtgg 687
Query: 560 gcatgggtggcgtcgggaagactactctagctcaaatggtgtacaatgatgacaatttga 619
| |||||||| ||||| ||||| |||||||| |||||| |||||||||||||||||||||
Sbjct: 686 gaatgggtggagtcggaaagacaactctagcccaaatgttgtacaatgatgacaatttga 627
Query: 620 agcaaatttgtaactttgatttcaaagcatgggtttgtgtttctgaagcatttgatattt 679
| |||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 626 atcaaaattttaattttgattccaaagcatgggtttgtgtttctgaagcatttgatatcg 567
Query: 680 tgagggttacaaaaactttaacagaagcactcactaaaagaacttgtgaaatgaatgatc 739
|||||||||| |||||||||||||| ||||| ||| || | ||||| |||| ||||||
Sbjct: 566 tgagggttacgaaaactttaacagaggcacttactcaacaagcttgtcaaatcaatgatt 507
Query: 740 taaatttacttcaagaaaatttgctggaaaatttgagggtgcaaaaattcttaattattc 799
| |||| |||||| || || ||| ||||||| | | || | |||||||||| |||||
Sbjct: 506 ttaattcacttcaggagaagttggtggaaaagctaaaggggaaaaaattcttcattatat 447
Query: 800 tggatgatgtttggattgaggattatgttaattggaatcttcttagaaaatctttgctac 859
||||||||||||||||||| ||||||| | |||||| ||||||| |||| |||| | |
Sbjct: 446 tggatgatgtttggattgaagattatgacagttggaaccttcttaaaaaaccttttcaat 387
Query: 860 gagggattagggggagcaaaattcttgtaacaacccgtagtgaaaaggttgcttctattg 919
||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 386 atgggatgaggggaagtaaaattcttgtaacaacccgtagtgaaaatgttgcttccattg 327
Query: 920 tccaaacagtctgcccttactatctaaaccaactatcggatggggattgttggtttgtgt 979
||||||| || ||||| || ||||||||||||| |||| ||||||||| ||||
Sbjct: 326 tccaaactgttcatacttaccatttaaaccaactatcagatgaacattgttggtcggtgt 267
Query: 980 ttgcgaaccatgcatgtctttcttcagcgtttggtgagaatgcagtatctctaga-aaaa 1038
||| |||||||||||||||||| || | ||||||||||||| | ||||||| ||||
Sbjct: 266 ttgaaaaccatgcatgtctttctcaaggatctggtgagaatgcaacagctctagagaaaa 207
Query: 1039 attgg-taggatgattgtgaagaagtgtaaggggttgcctttagcagcacagtcgcttgg 1097
||||| | ||| |||||| |||||||||||||| | |||||||| ||||| || || ||
Sbjct: 206 attggcttgga-gattgttaagaagtgtaagggacttcctttagctgcacaatcactcgg 148
Query: 1098 aagtttattgcaaagaaagcatgatattcgggattggactaatatattgaatagtgatat 1157
| |||||||| |||||||| ||||||| ||||||||| |||| || || ||||||| ||
Sbjct: 147 aggtttattgagaagaaagcgtgatattagggattggaataatgtactgtatagtgacat 88
Query: 1158 ttgggaattatctgaaagtgaaagtaagattattccagcattgagaattagttataacta 1217
|||||||||| |||| |||| |||||||||||||||| |||||||||| |||||| | ||
Sbjct: 87 ttgggaattacctgacagtggaagtaagattattccatcattgagaatcagttatcatta 28
Query: 1218 tcttcctc 1225
||| ||||
Sbjct: 27 tctccctc 20
>gnl|LJGI|TC79449 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance
protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-2 - Glycine max
(Soybean), partial (19%)
Length = 793
Score = 204 bits (103), Expect = 2e-51
Identities = 438/547 (80%), Gaps = 2/547 (0%)
Strand = Plus / Plus
Query: 868 agggggagcaaaattcttgtaacaacccgtagtgaaaaggttgcttctattgtccaaaca 927
|||||||||||||||||||| || ||||||||||| ||||||||||| | ||||||||
Sbjct: 62 agggggagcaaaattcttgtcacgacccgtagtgatgaggttgcttctgtagtccaaact 121
Query: 928 gtctgcccttactatctaaaccaactatcggatggggattgttggtttgtgtttgcgaac 987
| ||| | || ||| ||||||||| ||| |||||||||| || ||||| ||
Sbjct: 122 ggtcaaactttcaatttaagccaactatcaaatgaagattgttggtcggtatttgcaaat 181
Query: 988 catgcatgtctttcttcagcgtttggtgagaatgcagtatctctagaaaaaattgg-tag 1046
||||||||||||| ||| || ||||||||| || || || | || |||||||| | |
Sbjct: 182 catgcatgtcttttcccaggattaggtgagaatacaatagctttggagaaaattggcttg 241
Query: 1047 gatgattgtgaagaagtgtaaggggttgcctttagcagcacagtcgcttggaagtttatt 1106
|| |||||| |||||||||||||| | |||||||| ||||| || |||||| |||||||
Sbjct: 242 ga-gattgttaagaagtgtaagggactacctttagcggcacaatcacttggaggtttatt 300
Query: 1107 gcaaagaaagcatgatattcgggattggactaatatattgaatagtgatatttgggaatt 1166
| |||||||||| | ||| |||||||| |||| |||||||| |||| ||||||||| |
Sbjct: 301 gagaagaaagcataacattaaggattggaataatgtattgaattgtgacatttgggaact 360
Query: 1167 atctgaaagtgaaagtaagattattccagcattgagaattagttataactatcttcctcg 1226
||||||||||||||| |||||||| ||| |||||||||| |||||| | ||||| |||
Sbjct: 361 atctgaaagtgaaagcaagattataccatcattgagaatcagttatcattatctcccttc 420
Query: 1227 acatttgaaacgttgctttgtttactgttcattgtttcccaaggattatgaatttgtgga 1286
|||||||||||||||||| ||| | ||||| | ||| || ||||||||||||| |
Sbjct: 421 ttatttgaaacgttgctttgcttatttctcattatatcctaaagattatgaatttgaaaa 480
Query: 1287 agatgaattaatcttgttatggatggctgaagatctattacctccaccaaaaacgagaaa 1346
| |||| ||||| || | |||||||| |||||||| ||||| ||||||||| ||||
Sbjct: 481 aaatgatgtaatcctgctgtggatggccgaagatcttttaccaccaccaaaacaaggaaa 540
Query: 1347 aacattagaagaagttggttatgagtgttttgatgatttagtgtcaagttcatttcttca 1406
||| || | ||||||||| |||||| | |||| ||||| || || |||||||||||
Sbjct: 541 aactttgaacgaagttggtgatgagtatcttgactgcttagtttcgagatcatttcttca 600
Query: 1407 acgctca 1413
|||||||
Sbjct: 601 acgctca 607
>gnl|LJGI|DC598254 similar to UniRef100_A2Q524 Cluster: Disease resistance protein; n=1;
Medicago truncatula|Rep: Disease resistance protein -
Medicago truncatula (Barrel medic), partial (16%)
Length = 569
Score = 151 bits (76), Expect = 3e-35
Identities = 201/242 (83%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 1743 attgctccatttgcgttatttggatttctcaacaacatatataaagtcattgccagagtc 1802
|||| |||||||||||||||||||| | || | ||| ||| |||||||||||||| |
Sbjct: 328 attgatccatttgcgttatttggatctatccaagacaggaatagagtcattgccagaggc 387
Query: 1803 attgtgtaatttgtataacctgcaaacattgaagctggattattgttatgagctgactat 1862
||||||||||||||| || |||||||||||||||||||| | ||||| | |||||||||
Sbjct: 388 attgtgtaatttgtacaatctgcaaacattgaagctggaattttgttgtaggctgactat 447
Query: 1863 gctacccagtggcatgcaaaatctgctaaagctgcgccgtcttggtattgatgaaactcc 1922
|||||| |||| |||||||| || | || ||| | |||||||||||||||||||||
Sbjct: 448 gctacctggtggtatgcaaaaacttgtgaacttgcactatcttggtattgatgaaactcc 507
Query: 1923 t---ataaagaagatgcccaaaggaatgggcaaactaaaccagttacaacacttacctta 1979
| ||| || ||||||| ||||||||||||||| |||| ||||| || || ||||||||
Sbjct: 508 taaaatacaggagatgcctaaaggaatgggcaaattaaagcagttgcagcatttacctta 567
Query: 1980 ct 1981
||
Sbjct: 568 ct 569
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 862 gggattagggggagcaaaattcttgtaacaacccgtagtga 902
||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 29 gggatgaggggaagtaaaattcttgtaacaacccgtagtga 69
>gnl|LJGI|BP056393 similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease resistance
protein Rps1-k-1; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-1 - Glycine max
(Soybean), partial (9%)
Length = 421
Score = 145 bits (73), Expect = 2e-33
Identities = 213/261 (81%)
Strand = Plus / Plus
Query: 1062 gtgtaaggggttgcctttagcagcacagtcgcttggaagtttattgcaaagaaagcatga 1121
||||||||||| |||||| | ||||| || |||||| | ||||||| | | ||||||||
Sbjct: 144 gtgtaaggggtcacctttancggcacaatcacttggaggcttattgcgagggaagcatga 203
Query: 1122 tattcgggattggactaatatattgaatagtgatatttgggaattatctgaaagtgaaag 1181
||| | || || | |||||||||||||| | ||||||||| | |||||| ||| ||
Sbjct: 204 tatcagagactgnaacaatatattgaatagcaacatttgggaacttcctgaaaatgagag 263
Query: 1182 taagattattccagcattgagaattagttataactatcttcctcgacatttgaaacgttg 1241
|| ||||||| ||||||||||||||||||| | ||||| |||| |||| ||||||||||
Sbjct: 264 caatattattctagcattgagaattagttatcattatctacctccacatctgaaacgttg 323
Query: 1242 ctttgtttactgttcattgtttcccaaggattatgaatttgtggaagatgaattaatctt 1301
|| ||||| |||||||||||||| ||||||||| | |||| | |||||| |||||||
Sbjct: 324 tttngtttattgttcattgtttccgaaggattataagtttgataangatgaactaatctt 383
Query: 1302 gttatggatggctgaagatct 1322
||| |||||||| || |||||
Sbjct: 384 gttgtggatggcggaggatct 404
>gnl|LJGI|DC592854 weakly similar to UniRef100_A7QRA9 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 566
Score = 123 bits (62), Expect = 6e-27
Identities = 214/264 (81%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 13 gtgggtggagctttcctcagtgcattctttgaggtgattttccacaagctggcttcacct 72
||||| |||||||||||| |||||||| || | || ||||| ||||||| |||||||||
Sbjct: 38 gtgggaggagctttcctcggtgcattccttaatgttgttttcgacaagcttgcttcacct 97
Query: 73 gaggttatcaatttcatccgagggaagaagcttgaccccaagttgcttcaaaggctggag 132
|||||| |||| ||||||||||| |||||||||| ||| || ||| | ||| || ||
Sbjct: 98 gaggttgtcaacttcatccgaggcaagaagcttggccc---tttacttgacaggatgaag 154
Query: 133 actactctgaaagtggttgcagctgtgcttaacgatgctgagaagaaacaaatccgagat 192
|| ||||| | |||||| ||||||||| || ||||||||||||||||| ||| | ||
Sbjct: 155 acaactctcacagtggtcaaagctgtgctcaatgatgctgagaagaaacagatcagtgac 214
Query: 193 gctaatgtaaacaaatggctagatgatctcaaagatgctgtttacatggctgatgacttt 252
|| |||| || | ||||| ||||| |||||| ||| ||| |||||||||||||||||
Sbjct: 215 tctgatgtcaaagactggctcgatgaactcaaacatgttgtctacatggctgatgacttg 274
Query: 253 ttggatgaagtttctaccaaagct 276
||||| | |||| ||||||||||
Sbjct: 275 atggatcatgtttgtaccaaagct 298
Score = 73.8 bits (37), Expect = 5e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 345 taggttggaagacatagttgatcgattagagtctatcttaaaactcaaagagagtcttga 404
|||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 433 taggttggaagaaatagttgacaagctagagcatatcttaaaactaaaagagagtcttga 492
Query: 405 tctcagagagattgcaa 421
||||| |||||||||||
Sbjct: 493 tctcaaagagattgcaa 509
>gnl|LJGI|GO026128 weakly similar to UniRef100_A7QRD2 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 762
Score = 119 bits (60), Expect = 9e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 154 gctgtgcttaacgatgctgagaagaaacaaatccgagatgctaatgtaaacaaatggcta 213
||||||||| | ||||||||||| ||||| ||| | | ||||||| ||||| |||||
Sbjct: 267 gctgtgcttgatgatgctgagaacaaacagatcagtaactctaatgtcaacaagtggctc 326
Query: 214 gatgatctcaaagatgctgtttacatggctgatgactttttggatgaagtttctaccaaa 273
|||| ||||||| || ||| ||||||||||||||||| |||||||||||||||||| |
Sbjct: 327 aatgaactcaaagttgttgtctacatggctgatgacttgctggatgaagtttctaccata 386
Query: 274 gcttcaactcaaaaggaggtaact 297
||| ||||||||||||||||||||
Sbjct: 387 gctgcaactcaaaaggaggtaact 410
Score = 83.8 bits (42), Expect = 5e-15
Identities = 110/132 (83%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 378 tatcttaaaactcaaagagagtcttgatctcagagagattgcaaacgagaacttatcgtc 437
||||||||||||||||| ||||||| |||||| ||||||||||| || || | || ||
Sbjct: 458 tatcttaaaactcaaagtgagtcttaatctcaaagagattgcaactgataattcctcatc 517
Query: 438 tagaactccgtcaacatctctgcaagatggatttcacatatttggaagggatggagacaa 497
|||| ||| ||||||||| ||| ||||||| | |||| ||||||||||| ||||||
Sbjct: 518 tagagatccctcaacatctgtgccagatgga---aaaatatatggaagggatgaagacaa 574
Query: 498 gaaggccataat 509
||||||||||||
Sbjct: 575 gaaggccataat 586
>gnl|LJGI|GO035198 weakly similar to UniRef100_A7QRC9 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 373
Score = 107 bits (54), Expect = 3e-22
Identities = 225/281 (80%), Gaps = 12/281 (4%)
Strand = Plus / Plus
Query: 80 tcaatttcatccgagggaagaagcttgaccccaagttgcttcaaaggctggagactactc 139
|||| |||||||||||||||||||||| ||| || ||| ||||| || |||| ||||
Sbjct: 59 tcaacttcatccgagggaagaagcttggccct---ttacttgaaaggttgaagacaactc 115
Query: 140 tgaaagtggttgcagctgtgcttaacgatgctgagaagaaacaaatccgagatgctaatg 199
| |||||||| ||||||||| || ||||||||||||||||| || ||| || |||
Sbjct: 116 tcaaagtggtcagagctgtgctcaatgatgctgagaagaaacagattacagactctgatg 175
Query: 200 taaacaaatggctagatgatctcaaagatgctgtttacatggctgatgactttttggatg 259
| || | |||| ||| |||||| ||| ||| ||||||||||||||||| |||||||
Sbjct: 176 ttaaagactggcccagtgaactcaaacatgttgtctacatggctgatgacttgttggatg 235
Query: 260 aagtttctaccaaag------cttcaactcaaaaggaggta---actaacttgttctctc 310
||||||||||||||| || ||||||||||||||||| |||||||| ||||||
Sbjct: 236 aagtttctaccaaagctgctactgcaactcaaaaggaggtaactactaacttcatctctc 295
Query: 311 gccttttcaatgtgcaagatagggagatggtaagtaggttg 351
|| ||||||||| |||||| |||| |||| |||||||||
Sbjct: 296 gctttttcaatgcacaagatggggatatggctagtaggttg 336
>gnl|LJGI|DC593605 weakly similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease
resistance protein Rps1-k-1; n=1; Glycine max|Rep:
NBS-LRR type disease resistance protein Rps1-k-1 -
Glycine max (Soybean), partial (13%)
Length = 550
Score = 71.9 bits (36), Expect = 2e-11
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 536 aagtatctgtgatccctattgtgggcatgggtggcgtcgggaagactactctagctcaaa 595
|||||||||| |||||||||||||||||||| || || ||||| || ||| |||| |||
Sbjct: 426 aagtatctgtcatccctattgtgggcatgggcggagtggggaaaaccactttagcccaac 485
Query: 596 tggtgtacaatgatga 611
||||||| ||||||||
Sbjct: 486 tggtgtataatgatga 501
>gnl|LJGI|DC600043 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance
protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-2 - Glycine max
(Soybean), partial (9%)
Length = 512
Score = 54.0 bits (27), Expect = 4e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1367 atgagtgttttgatgatttagtgtcaagttcatttcttcaacgctca 1413
|||||||||||||| || |||| || || ||||||||||||||||||
Sbjct: 4 atgagtgttttgattatctagtttcgagatcatttcttcaacgctca 50