Miyakogusa Predicted Gene

Lj0g3v0353729.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0353729.1 tr|G0ME35|G0ME35_CAEBE CBN-MNP-1 protein
OS=Caenorhabditis brenneri GN=Cbn-mnp-1 PE=4
SV=1,40,1.2,seg,NULL,CUFF.24369.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80819 similar to UniRef100_A7NXK2 Cluster: Chromosome...   460   e-129
gnl|LJGI|BW597108                                                      90   1e-17
gnl|LJGI|FS360352 similar to UniRef100_A7QYE5 Cluster: Chromosom...    54   5e-07

>gnl|LJGI|TC80819 similar to UniRef100_A7NXK2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 717

 Score =  460 bits (232), Expect = e-129
 Identities = 241/244 (98%)
 Strand = Plus / Plus

                                                                       
Query: 76  ggtcaaatcttgcccaggttccacaatattcctggctccgccactgtttctaacgtgatt 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  ggtcaaatcttgcccaggttccacaatattcctggctccgccactgtttctaacgtgatt 140

                                                                       
Query: 136 cagttccttccagaatggcttccgcaatcttcagaaccttccaagttcacccctttctac 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cagttccttccagaatggcttccgcaatcttcagaaccttccaagttcacccctttctac 200

                                                                       
Query: 196 tttgtccagcattatttctcagaagaacaaatggggttttgcgctgcgcatcgtcacaat 255
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tatgtccagcattatttctcagaagaacaaatggggtttagcgctgcgcatcgtcacaat 260

                                                                       
Query: 256 cccaaacagagacccaacagcggcagcagcacccaccacaaaccaaggtttcaacccagt 315
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaacagagacccaacagcggcagcagcacccaccacaaaccaaggtttcaacccagt 320

               
Query: 316 ccaa 319
           ||||
Sbjct: 321 ccaa 324


>gnl|LJGI|BW597108 
          Length = 483

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                        
Query: 34  attctagatgatgattttgaggttgttgagaaatgtgaacaaggt 78
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 attctagatgatgattttgaggttgttgagaaatgtgaacaaggt 277


>gnl|LJGI|FS360352 similar to UniRef100_A7QYE5 Cluster: Chromosome undetermined
           scaffold_245, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_245,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (18%)
          Length = 710

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 84  cttgcccaggttccacaatattcctggctccgccactgt 122
           |||||||||| ||||||| |||| |||||||||||||||
Sbjct: 170 cttgcccaggctccacaaaattcttggctccgccactgt 208