Miyakogusa Predicted Gene
- Lj0g3v0353609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353609.1 Non Chatacterized Hit- tr|I1K2A0|I1K2A0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51080
PE,26.28,4e-18,Frigida,Frigida-like; coiled-coil,NULL; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.24341.1
(2511 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66034 745 0.0
gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotei... 184 2e-45
gnl|LJGI|TC63372 159 1e-37
gnl|LJGI|BP043783 similar to UniRef100_Q4C4Z4 Cluster: Isopenten... 84 5e-15
>gnl|LJGI|TC66034
Length = 677
Score = 745 bits (376), Expect = 0.0
Identities = 382/384 (99%)
Strand = Plus / Plus
Query: 2128 cagaccctgggtttcacagacaaagtctctgattttgttcagagccttattaagaaggag 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagaccctgggtttcacagacaaagtctctgattttgttcagagccttattaagaaggag 61
Query: 2188 cagtattttgaagctgttagattcatttgtgcatttaagttggaagacaagaatcaacct 2247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagtattttgaagctgttagattcatttgtgcatttaagttggaagacaagaatcaacct 121
Query: 2248 gttgatctcttgcggaaatacgcgcagaatgcaaaactgatttctgggcgcatttgcaag 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gttgatctcttgcggaaatacgcgcagaatgcaaaactgatttctgggcgcatttgcaag 181
Query: 2308 aacaccatgtctcttgaaatcaaggatgatgccagagatcaagaaattgctagcctgaaa 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aacaccatgtctcttgaaatcaaggatgatgccagagatcaagaaattgctagcctgaaa 241
Query: 2368 agtgttcaacaatgcatttcagacaacaatctagaatctgaggatctaattaatgagatt 2427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agtgttcaacaatgcatttcagacaacaatctagaatctgaggatctaattaatgagatt 301
Query: 2428 caacatcgcattaatgagctaagttgggaaaaaggcattggtgtttataacctaaggaaa 2487
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caacatcgcattaatgggctaagttgggaaaaaggcattggtgtttataacctaaggaaa 361
Query: 2488 agaaaagcttctaatggacactag 2511
||||||||||||||||||||||||
Sbjct: 362 agaaaagcttctaatggacactag 385
>gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotein; n=1; Human
immunodeficiency virus 1|Rep: Envelope glycoprotein -
Human immunodeficiency virus 1, partial (8%)
Length = 687
Score = 184 bits (93), Expect = 2e-45
Identities = 207/245 (84%)
Strand = Plus / Plus
Query: 2207 gattcatttgtgcatttaagttggaagacaagaatcaacctgttgatctcttgcggaaat 2266
||||||||||||||| |||| ||| ||||| || || || |||||||| ||||| |||
Sbjct: 2 gattcatttgtgcatataagctggtggacaataaccagccagttgatctattgcgagaat 61
Query: 2267 acgcgcagaatgcaaaactgatttctgggcgcatttgcaagaacaccatgtctcttgaaa 2326
||| ||||||||||||||||||||||| | || |||||||||||||| || |||||||
Sbjct: 62 acgtgcagaatgcaaaactgatttctgagatcagttgcaagaacaccaactcccttgaaa 121
Query: 2327 tcaaggatgatgccagagatcaagaaattgctagcctgaaaagtgttcaacaatgcattt 2386
|||||||| | | ||||||||||||||| || | ||| || ||||| | | |||||||
Sbjct: 122 tcaaggataaggtcagagatcaagaaatggcaactttgacaaatgttctagagtgcattt 181
Query: 2387 cagacaacaatctagaatctgaggatctaattaatgagattcaacatcgcattaatgagc 2446
|||||||||| |||||||||| ||||||||||||||||||| || |||||||| |||||
Sbjct: 182 cagacaacaacctagaatctggggatctaattaatgagattgaagatcgcattcttgagc 241
Query: 2447 taagt 2451
|||||
Sbjct: 242 taagt 246
>gnl|LJGI|TC63372
Length = 728
Score = 159 bits (80), Expect = 1e-37
Identities = 232/285 (81%), Gaps = 12/285 (4%)
Strand = Plus / Plus
Query: 2165 ttcagagccttattaagaaggagcagtattttgaagctgttagattcatttgtgcattta 2224
|||||| |||| |||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 13 ttcagaaccttgttaagaagcagcaacatattgaagctgttagattcatttgtgcattta 72
Query: 2225 agttggaagacaagaatcaacctgttgatctcttgcggaaatacgcgcagaatgcaaaac 2284
| || | ||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 73 aattagctgacaagaatcaacctgtcgatctcttgtggaaatacatgcagaatgcaaaac 132
Query: 2285 tgatttctgggcgcatttgcaagaacaccatgtctcttgaaatcaaggatgatgccagag 2344
|| |||||| ||||||||| || ||||||||| ||||| | |||||||
Sbjct: 133 tggtttctg------------agaacaccacctcccttgaaatccaggataaggccagag 180
Query: 2345 atcaagaaattgctagcctgaaaagtgttcaacaatgcatttcagacaacaatctagaat 2404
|||||||| |||| | ||| || ||||| || | ||||||||||||||| ||||||
Sbjct: 181 atcaagaagttgccactttgacaaatgttctactgtccatttcagacaacaagttagaat 240
Query: 2405 ctgaggatctaattaatgagattcaacatcgcattaatgagctaa 2449
||| || |||| |||||||||||| | |||||||| ||||||||
Sbjct: 241 ctgtgggtctacttaatgagattcgagatcgcattcttgagctaa 285
>gnl|LJGI|BP043783 similar to UniRef100_Q4C4Z4 Cluster: Isopentenyl-diphosphate
delta-isomerase; n=1; Crocosphaera watsonii WH 8501|Rep:
Isopentenyl-diphosphate delta-isomerase - Crocosphaera
watsonii, partial (5%)
Length = 482
Score = 83.8 bits (42), Expect = 5e-15
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 2384 tttcagacaacaatctagaatctgaggatctaattaatgagattcaacatcgcattaatg 2443
|||||||| || ||||||| ||||||| |||||||| |||||||| ||||||||| ||
Sbjct: 482 tttcagacnaccatctagactctgagggtctaattagcgagattcatgatcgcattactg 423
Query: 2444 agctaagttgggaaaaaggcattggtgtttataacctaaggaaaagaaa 2492
|||||| | || ||| |||| |||||||||| |||||||||||||||
Sbjct: 422 agctaaataggccaaatggcagtggtgtttatttcctaaggaaaagaaa 374