Miyakogusa Predicted Gene
- Lj0g3v0353419.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353419.1 Non Chatacterized Hit- tr|I1KAJ3|I1KAJ3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.22,0,seg,NULL;
Translation proteins SH3-like domain,Translation protein SH3-like; KOW
(Kyprides, Ouzounis,CUFF.24327.1
(2292 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73314 similar to UniRef100_A7NSK9 Cluster: Chromosome... 1532 0.0
gnl|LJGI|DC595234 similar to UniRef100_A7NSK9 Cluster: Chromosom... 236 5e-61
gnl|LJGI|FS350429 weakly similar to UniRef100_A7NSK9 Cluster: Ch... 84 4e-15
>gnl|LJGI|TC73314 similar to UniRef100_A7NSK9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 799
Score = 1532 bits (773), Expect = 0.0
Identities = 790/798 (98%)
Strand = Plus / Plus
Query: 985 aggaaaatgagtgtgcaggataagctgaagaatacagtatcgtcaaaggacgttgtgcgg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggaaaatgagtgtgcaggataagctgaagaatacagtatcgtcaaaggacgttgtgcgg 61
Query: 1045 attgttgagggtccctgtagaggcaaacaaggtcctgtggagcacatatatagaagaatc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attgttgagggtccctgtagaggcaaacaaggtcctgtggagcacatatatagaagaatc 121
Query: 1105 ttgtttatctttgatcgtcatcatcttgaacatgctggctttatatgtgctaaggcccaa 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgtttatctttgatcgtcatcatcttgaacatgctggctttatatgtgctaaggcccaa 181
Query: 1165 tcatgtgtagttgtgggaggttcccgttccagtggtgacagaaatggtgatgcctactca 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcatgtgtagttgtgggaggttcccgttccagtggtgacagaaatggtgatgcctactca 241
Query: 1225 aaactctcggccttcagaactccacctcctattccagattccccgaagaggtttcctcga 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaactctcggccttcagaactccacctcctattccagattccccgaagaggtttcctcga 301
Query: 1285 ggagggcgaggatttgattctggagggaggcataggggcggaannnnnnnacatgatggt 1344
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 302 ggagggcgaggacttgattctggagggaggcataggggcggaagggggggacatgatggt 361
Query: 1345 ttgtcaggtacaacagtcaaagtacgccagggtccctataaaggttatcgtgggcgtgtt 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgtcaggtacaacagtcaaagtacgccagggtccctataaaggttatcgtgggcgtgtt 421
Query: 1405 atagaggttaaaggcgcaatggttcgggttgaattagaatcccaaatgaaggttgtaaca 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atagaggttaaaggcgcaatggttcgggttgaattagaatcccaaatgaaggttgtaaca 481
Query: 1465 gttgatcgcaaccatatatctgacaatgtggctgtaaccccataccgtgatacaactcga 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttgatcgcaaccatatatctgacaatgtggctgtaaccccataccgtgatacaactcga 541
Query: 1525 tatgggatgggaagtgaaaccccaatgcatccatctcgaactcccttacatccatatatg 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tatgggatgggaagtgaaaccccaatgcatccatctcgaactcccttacatccatatatg 601
Query: 1585 acccctatgagagatcctggagcaacacctattcatgatggaatgaggacgccaatgcgt 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acccctatgagagatcctggagcaacacctattcatgatggaatgaggacgccaatgcgt 661
Query: 1645 gaccgagcatggaatccttatacaccaatgagtcctccaagggataactgggaagatgga 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaccgagcatggaatccttatacaccaatgagtcctccaagggataactgggaagatgga 721
Query: 1705 aatccgggctcttggggagccagtccacagtaccagccaggaagtcctccttcccggcca 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aatccgggctcttggggagccagtccacagtaccagccaggaagtcctccttcccggcca 781
Query: 1765 tatgaagccccaactcct 1782
||||||||||||||||||
Sbjct: 782 tatgaagccccaactcct 799
>gnl|LJGI|DC595234 similar to UniRef100_A7NSK9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 228
Score = 236 bits (119), Expect = 5e-61
Identities = 144/151 (95%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 2143 acattaacagtccttcctactgaaatggaagctgtagtaccgaggaaatcggacaaaatt 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 acattaacagtccttcctactgaaatggaagctgtagtaccgaggaaatcggacaaaatt 169
Query: 2203 aaaattatgggtggggcattgcgtggtgccaccggcaagttgattggagtag-atggtac 2261
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 168 aaaattatgggtggggcattgcgtggtgccaccggcaagttgattggagtagcctctccc 109
Query: 2262 tgatggtattgtaaaggtagacgacacattg 2292
||||||||||||||||||||||||||||||
Sbjct: 108 cgatggtattgtaaaggtagacgacacattg 78
>gnl|LJGI|FS350429 weakly similar to UniRef100_A7NSK9 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 617
Score = 83.8 bits (42), Expect = 4e-15
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 629 aaaaggaactttgtaagtattttgaacctggaaatcatgttaaagttgtatccggtgctc 688
|||||||||| ||||| |||||||||| ||||| ||||||||||||||| | ||||||
Sbjct: 554 aaaaggaactctgtaaatattttgaacttggaagtcatgttaaagttgttgctggtgctg 495
Query: 689 aagaaggtgctactggcatggtagtaaaggtgga 722
|||| |||| ||||||||||| || ||||||||
Sbjct: 494 aagagggtgaaactggcatggttgttaaggtgga 461