Miyakogusa Predicted Gene

Lj0g3v0353299.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0353299.2 tr|F2DEB0|F2DEB0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,59.63,2e-16,seg,NULL;
EDR1,Armadillo repeat-containing protein 3 and
Serine/threonine-protein kinase CTR1,CUFF.24347.2
         (828 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO013220 similar to UniRef100_A7PJH7 Cluster: Chromosom...   420   e-117
gnl|LJGI|BW596128 similar to UniRef100_A7PJH7 Cluster: Chromosom...   115   4e-25
gnl|LJGI|TC73851 weakly similar to UniRef100_Q8VZH0 Cluster: AT3...    96   4e-19

>gnl|LJGI|GO013220 similar to UniRef100_A7PJH7 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 753

 Score =  420 bits (212), Expect = e-117
 Identities = 212/212 (100%)
 Strand = Plus / Plus

                                                                       
Query: 617 gctataggtcagatggtgcgtcctcattagaacctcgtaggatacgaagaagaagcatca 676
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gctataggtcagatggtgcgtcctcattagaacctcgtaggatacgaagaagaagcatca 61

                                                                       
Query: 677 gcattacaccagagattggtgatgatatcgtaagggctgtacgggcaatgaatgaaacac 736
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  gcattacaccagagattggtgatgatatcgtaagggctgtacgggcaatgaatgaaacac 121

                                                                       
Query: 737 taaagcaaaatcgtcttctgagagaacaaggggatgataactcattctcccattctccaa 796
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taaagcaaaatcgtcttctgagagaacaaggggatgataactcattctcccattctccaa 181

                                           
Query: 797 acaacagaagtactgatgcaaatcttcagaaa 828
           ||||||||||||||||||||||||||||||||
Sbjct: 182 acaacagaagtactgatgcaaatcttcagaaa 213


>gnl|LJGI|BW596128 similar to UniRef100_A7PJH7 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 436

 Score =  115 bits (58), Expect = 4e-25
 Identities = 121/142 (85%)
 Strand = Plus / Plus

                                                                       
Query: 514 agtccagaacatccctcatatcgagcccgtgcacggtccttacttagtggtgataggaaa 573
           |||||||||||||| |||| |||||| |||| ||||||| | ||||||||||| ||||  
Sbjct: 295 agtccagaacatccatcatttcgagcgcgtggacggtccatgcttagtggtgacaggact 354

                                                                       
Query: 574 gctttcagagaatttgctgatgaccaggccacatcaagatccagctataggtcagatggt 633
           || || || || || || ||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 355 gcatttagggatttcgccgatgaccaggctacttcaagatccagctataagtcagatggt 414

                                 
Query: 634 gcgtcctcattagaacctcgta 655
           || ||||||| |||| ||||||
Sbjct: 415 gcatcctcatcagaagctcgta 436



 Score = 95.6 bits (48), Expect = 4e-19
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                       
Query: 450 agcagaaaatgattcctgtgattcaccattagaaccaaacagtcctttatttggagttcc 509
           ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 21  agcagaaaatgattcttgtgattcaccattagaaccaaacagtcctttatatggggtttc 80

                       
Query: 510 ggagagtccaga 521
            |||||| ||||
Sbjct: 81  agagagtgcaga 92


>gnl|LJGI|TC73851 weakly similar to UniRef100_Q8VZH0 Cluster: AT3g58640/F14P22_230;
           n=1; Arabidopsis thaliana|Rep: AT3g58640/F14P22_230 -
           Arabidopsis thaliana (Mouse-ear cress), partial (32%)
          Length = 953

 Score = 95.6 bits (48), Expect = 4e-19
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgaagcaactgattgtgacattagtcaaaggattaaactcaaacccagctgcaataatta 64
           |||||||| | |||||| |||| || || ||||| ||||| || ||||||||  | ||||
Sbjct: 838 tgaagcaattaattgtggcattggttaagggattgaactccaatccagctgcggtgatta 897

                                                                   
Query: 65  agaagatagctggattagtttctgatttttataagcgacccaatgtggaaagtcca 120
           ||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||
Sbjct: 898 agaagattgctggattagtttctgatttttataagcggccaaatgcagaaagtcca 953