Miyakogusa Predicted Gene
- Lj0g3v0353299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353299.1 Non Chatacterized Hit- tr|K4DCT3|K4DCT3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.97,0.000000000002,seg,NULL; EDR1,Armadillo repeat-containing
protein 3 and Serine/threonine-protein kinase CTR1,CUFF.24347.1
(1122 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013220 similar to UniRef100_A7PJH7 Cluster: Chromosom... 607 e-173
gnl|LJGI|BW596128 similar to UniRef100_A7PJH7 Cluster: Chromosom... 355 4e-97
gnl|LJGI|TC73851 weakly similar to UniRef100_Q8VZH0 Cluster: AT3... 96 6e-19
>gnl|LJGI|GO013220 similar to UniRef100_A7PJH7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 753
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 815 gctataggtcagatggtgcgtcctcattagaacctcgtaggatacgaagaagaagcatca 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctataggtcagatggtgcgtcctcattagaacctcgtaggatacgaagaagaagcatca 61
Query: 875 gcattacaccagagattggtgatgatatcgtaagggctgtacgggcaatgaatgaaacac 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcattacaccagagattggtgatgatatcgtaagggctgtacgggcaatgaatgaaacac 121
Query: 935 taaagcaaaatcgtcttctgagagaacaaggggatgataactcattctcccattctccaa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taaagcaaaatcgtcttctgagagaacaaggggatgataactcattctcccattctccaa 181
Query: 995 acaacagaagtactgatgcaaatcttcagaaaaatgtgccaaattctcatcctgatggtc 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acaacagaagtactgatgcaaatcttcagaaaaatgtgccaaattctcatcctgatggtc 241
Query: 1055 ataatgaaaggttggccttatattctcatcagtgtgaccaaggaacttcgcaaaaagcaa 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataatgaaaggttggccttatattctcatcagtgtgaccaaggaacttcgcaaaaagcaa 301
Query: 1115 tgtcgt 1120
||||||
Sbjct: 302 tgtcgt 307
>gnl|LJGI|BW596128 similar to UniRef100_A7PJH7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 436
Score = 355 bits (179), Expect = 4e-97
Identities = 355/416 (85%), Gaps = 12/416 (2%)
Strand = Plus / Plus
Query: 450 agcagaaaatgattcctgtgattcaccattagaaccaaacagtcctttatttggagttcc 509
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 21 agcagaaaatgattcttgtgattcaccattagaaccaaacagtcctttatatggggtttc 80
Query: 510 ggagagtgctgagaaggaggaaaacctccaattccataaaaaatttgaaatgtcttcaaa 569
|||||||| ||||||||||| |||||||||||||||| || ||||||| ||||||||
Sbjct: 81 agagagtgcagagaaggaggataacctccaattccatagaagatttgaagcatcttcaaa 140
Query: 570 tgcgtcaggcctttccttgagaaacatgatgttacgatcaaatagttgt----------- 618
|| ||||| || ||||| |||| |||||||||||||||||| | |
Sbjct: 141 tgtttcaggaattcccttgcgaaatatgatgttacgatcaaattctactctggacaggaa 200
Query: 619 -ttgagtttatctcatagtgaacccaacattgcaactgcatttggtcggcgtaatcggag 677
|||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 201 attgagtttctctcatagtgaacccaacattacaactgcatttggtcggcgtagtcggag 260
Query: 678 aaaggtcattgctgaacagaggacagctagttcaagtccagaacatccctcatatcgagc 737
||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||
Sbjct: 261 gaaggtcattgctgaacagaggactgctagttcaagtccagaacatccatcatttcgagc 320
Query: 738 ccgtgcacggtccttacttagtggtgataggaaagctttcagagaatttgctgatgacca 797
|||| ||||||| | ||||||||||| |||| || || || || || || ||||||||
Sbjct: 321 gcgtggacggtccatgcttagtggtgacaggactgcatttagggatttcgccgatgacca 380
Query: 798 ggccacatcaagatccagctataggtcagatggtgcgtcctcattagaacctcgta 853
||| || |||||||||||||||| |||||||||||| ||||||| |||| ||||||
Sbjct: 381 ggctacttcaagatccagctataagtcagatggtgcatcctcatcagaagctcgta 436
>gnl|LJGI|TC73851 weakly similar to UniRef100_Q8VZH0 Cluster: AT3g58640/F14P22_230;
n=1; Arabidopsis thaliana|Rep: AT3g58640/F14P22_230 -
Arabidopsis thaliana (Mouse-ear cress), partial (32%)
Length = 953
Score = 95.6 bits (48), Expect = 6e-19
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 5 tgaagcaactgattgtgacattagtcaaaggattaaactcaaacccagctgcaataatta 64
|||||||| | |||||| |||| || || ||||| ||||| || |||||||| | ||||
Sbjct: 838 tgaagcaattaattgtggcattggttaagggattgaactccaatccagctgcggtgatta 897
Query: 65 agaagatagctggattagtttctgatttttataagcgacccaatgtggaaagtcca 120
||||||| ||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 898 agaagattgctggattagtttctgatttttataagcggccaaatgcagaaagtcca 953